| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1841 |
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| Symbol | |
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| ID | 8807613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1955738 |
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| End bp | 1959415 |
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| Gene Length | 3678 bp |
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| Protein Length | 1225 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_003461068 |
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| Protein GI | 289209002 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.854938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00479666 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCAAG CCACAGCGGC GAAAGACTGG CATTTCTGGG TGGACCGGGG CGGGACGTTC
ACCGATCTGG TCGCGCGTGA TCCGGACGGG CGCCTGCACA CCCGCAAACT GCTTTCGGAA
AACCCGGAGG CCTACCGTGA CGCGGCCGTG CAGGGTATTC GCGATCTGCT GGAGCTCCCG
GCCGATGCAC CCATTCCGGA CGGCGTGGTG CACGAGGTGC GCATGGGCAC AACCGTGGCC
ACCAACGCCC TGCTCGAGCG CAAGGGGGAG CCCACGCTCC TGGTGATCAC CGAGGGGCTG
GAGGACGCAC TGGCGATCGG GCCTCAGGCG CGCCCCGATC TGTTCGCCCG CGAGATCCGG
CTGCCGACAC CGGTCTATAC GCGTGTGGAG CCGGTGCGCG AGCGGGTGAA TGCGGCGGGC
GAGGTCCTGC AGCCGGTCGA TCTGGACGCG CTGCGGCCGC GGCTGCAGGC GGCGCTGGCA
GATGGTATCC ACTGCGTGGC GATTGTCTGC CTGCACGGCT ATCGCTACCC GGCGCACGAG
CAGGCGATCG CCTCGCTGGC GCGCGAACTG GGCTTTGCCG AGGTCGCGAC CAGCCACCAG
ACCAGCCCGC TGATCAAGCT CGTCCCGCGT GGCGAGACCA CGGTGGTCGA TGCCTACCTC
TCGCCGGTGC TGCGCCGCTA TGTCGAGCAG GTCGCGGGCG AGCTGGGCCG CGTACCTCTG
CGCTTCATGC AGTCGCACGG CGGACTGGTG GACGCGGCGC GGTTTCGCGG GCGTGACGCG
ATCCTGTCGG GGCCGGCCGG CGGGATCGTT GGCGCACTCA AGACGGCTCG CCCGCTCGGT
TTCCAACGCC TGATTACCTT CGACATGGGT GGCACCTCCA CCGACGTCGC GCATCTGGCG
GGGGCGCTGG AACGCCGCCA GGAGAGCGAG GTGGCGGGTG CGCGGCTGCG TGTGCCCATG
CTCGATATCC ATACGGTCGC GGCCGGGGGC GGGTCGATCT GCCGCTTCGA TGGCATCCGT
CTGCGGGTGG GCCCGGAATC CGCCGGCGCC CAGCCCGGAC CCGCCTGTTA CGGCCAGGGC
GGGCCGCTGA CCGTCACCGA CTGCAACCTG CTGCTGGGGC GCCTGCGCCC GGAGTACTTC
CCGGCGGTGT TCGGGCCGGA TCGCGACCGG CCGCTGGATC CGGAACCGGT GCGCCGACAG
TTCGCGGAGC TGGCCGCCGA GGTGGCGGCC GCGACCGGAG AACCCGCCAC CCCGGAGGGC
CTGGCCGAGG GGGCGCTGCA GATCGCGGTG GAGCATATGG CCCAGGCGAT CAAGACCATC
TCGGTGCAGC GCGGGCATGA TGTCTCGCGT TATGCGCTGG TGTGTTTCGG TGGCGCTGGT
GGCCAGCACG CCTGCCGCGT GGCGGAACAG CTGGGCATGC GGCATATCCT GTTCCATCCG
CTCGGTGGCG TGCTGTCTGC CTACGGGATG GGGCTGGGCG AGTTGCGCGC CCTGCGCGAA
CGCAGCCTGG AGTGGCCGCT GGACGATCAG CACGCCGGGG CGATCGAGTC CGCCCTGGCG
GAACAGGCCG AGGCCGCTCG CGCCGCGCTG GCGGAGCAGG GTGTGGCGGC AACGGACATG
CGGATCGAAC GGCGGCTGCA CCTGCGCCTG GCCGGATCGG ACACCGCGCT GGAGGTGCCG
GCGGGCGAGC CCGCGGCGTT GATGGCCGCC TTTGCCGAGG CCTACCGCGC GCGCTATGGC
TTTGCCCCGC CGGATCGCGA GCTGGTGGTG GCGATCGCGA CCGCCGAGGC GATCGCCGCG
CCGAGGGAGA CCGCATCGGA ACACGTGGCG CCTGCGGCGT CCCGGGGGGC CGCGCCGGAG
GCGGATGCGG TCGCGATGGT CATCGACGGC GAACAGCGCC ATGTGCCGCT GTACCGACGG
GAATCGCTGC AACCGGGCAT GACCCTGGCC GGCCCGGCCA TCGTGATCGA GCCGACCGCG
ACGCTGGTGC TGGAACCTGG CTGGGCCGGG TGCATCGAGG CGGACGGGAC CCTGCGGCTG
GATCGCGAGC GGGGCAGCGC GCGGCGTGCG GGCGCGGCCG CAACGAACCC CGAGGCCGTC
CCGCGTGATC CGATCCTGCT GGAGGTGTTC AACAACCGCT TCATGGCGAT CGCCGACCAG
ATGGGGTTCA CTCTGCGCAA CACCGCGCAC TCGGTGAACA TCAAGGAGCG CCTGGACTTC
TCCTGTGCAC TGTTCGACGC CGAGGGCCGC CTGGTTGCCA ATGCCCCGCA CATGCCCGTC
CATCTCGGCT CCATGGGGGC CAGTGTGCGC GCGGTGGTGG AGGCGTTCGC GGGCGACCTG
CGCCCGGGCG ATGCCTTCGT GCTGAACGAC CCCTACAACG GCGGCACCCA CCTGCCGGAC
ATCACCGTGG TGACGCCGGT GTTCCTGGAT GGCGACGAAC AGGTAACCGA GGATACGTCT
GCAGCGGCCG GCCCCCCCGC GTTCTTCGTC GCCTCGCGCG GGCATCACGC GGATGTCGGC
GGCGTGACCC CGGGCTCCAT GCCCGCGTTC TCCACCTGCC TGGAGGAGGA GGGTGTGCTG
ATCCCGCCCA CCCGGCTCGT GCGCGACGGG GTGTTCGACA GCGACCGCCT GCGCGCCCGG
CTCGGCGAGG GTCGGTGGCC GGCGCGCAAC CCCGATCAGA ACCTCGCCGA TCTCGAGGCG
CAGGTTGCGG CCAACCGCAA GGGGCTGGAG GAGTTGGGCC GGCTGCTGGA TGAATACGGC
GCGGCCACGG TGACGGCCTA CATGGGCCAT GTGCTGGACA ACGCGGCCGA GGCCGTGGGA
CGGCTGATCC CGACGCTCGA GGACGGCCGG TTCGCATACG CGATGGACAA CGGCGCCGAG
GTGCAGGTGC GTGTGGTGCC CGATCCCGCG GCCCGGCGCC TGCGTATCGA CTTCACCGGC
ACCAGCGCCG TACGCGAGGA CAACTTCAAC GCGCCGAGCT CCATCGTGCG CGCGGCGGTG
CTGTATGTAC TGCGCACCCT GCTGGAGGAT GCGATCCCGC TGAATGACGG CTGCCTCGCC
CCGGTGGATC TGGTCATCCC GGAAGACAGT CTGCTGAACC CGGCACCGCC CGCCGCGGTG
GTGGCCGGCA ATGTCGAGAC CTCGCAGGTA GTCACCGATG CCCTGTTCGG GGCGCTGGGC
GTGCAGGCGG CGGCCCAGGG CACGATGAAC AACCTGACCT TCGGCAATGC CGACTACCAG
TACTACGAGA CGATCGCAGG CGGGGCCGGC GCGGGACCGG GTTACGCCGG GGCCAGTGCG
GTGCAGACGC ACATGACCAA CTCGCGGCTG ACCGATCCCG AGGTGCTGGA GAGCCGTTTC
CCGGTGCGGG TGGAATGCTT CGCCTACCGC CGCGGTTCTG GCGGGCAGGG GCGTTATGCG
GGCGGCGACG GGGTGATCCG TCGGCTTGGT TTCGACCAGG CGATGGAGGT CGTGCTGCTG
GCCAACCGTC GCCGGGTGCC GCCGTTCGGG ATCGCCGGAG GCGGGGCGGG CGCGCCGGGG
GAGGATTCGA TCCTGCGCGC CGACGGCACG CGCGAACCGA TGTCCGCCTG CGATCGCCGC
CAGATAGAGC CAGGCGATGC GATCGAGATA CGCACACCCG GTGGCGGTGG GTACGGGGAT
CGTCGCAGCG ATCCGTAG
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| Protein sequence | MTQATAAKDW HFWVDRGGTF TDLVARDPDG RLHTRKLLSE NPEAYRDAAV QGIRDLLELP
ADAPIPDGVV HEVRMGTTVA TNALLERKGE PTLLVITEGL EDALAIGPQA RPDLFAREIR
LPTPVYTRVE PVRERVNAAG EVLQPVDLDA LRPRLQAALA DGIHCVAIVC LHGYRYPAHE
QAIASLAREL GFAEVATSHQ TSPLIKLVPR GETTVVDAYL SPVLRRYVEQ VAGELGRVPL
RFMQSHGGLV DAARFRGRDA ILSGPAGGIV GALKTARPLG FQRLITFDMG GTSTDVAHLA
GALERRQESE VAGARLRVPM LDIHTVAAGG GSICRFDGIR LRVGPESAGA QPGPACYGQG
GPLTVTDCNL LLGRLRPEYF PAVFGPDRDR PLDPEPVRRQ FAELAAEVAA ATGEPATPEG
LAEGALQIAV EHMAQAIKTI SVQRGHDVSR YALVCFGGAG GQHACRVAEQ LGMRHILFHP
LGGVLSAYGM GLGELRALRE RSLEWPLDDQ HAGAIESALA EQAEAARAAL AEQGVAATDM
RIERRLHLRL AGSDTALEVP AGEPAALMAA FAEAYRARYG FAPPDRELVV AIATAEAIAA
PRETASEHVA PAASRGAAPE ADAVAMVIDG EQRHVPLYRR ESLQPGMTLA GPAIVIEPTA
TLVLEPGWAG CIEADGTLRL DRERGSARRA GAAATNPEAV PRDPILLEVF NNRFMAIADQ
MGFTLRNTAH SVNIKERLDF SCALFDAEGR LVANAPHMPV HLGSMGASVR AVVEAFAGDL
RPGDAFVLND PYNGGTHLPD ITVVTPVFLD GDEQVTEDTS AAAGPPAFFV ASRGHHADVG
GVTPGSMPAF STCLEEEGVL IPPTRLVRDG VFDSDRLRAR LGEGRWPARN PDQNLADLEA
QVAANRKGLE ELGRLLDEYG AATVTAYMGH VLDNAAEAVG RLIPTLEDGR FAYAMDNGAE
VQVRVVPDPA ARRLRIDFTG TSAVREDNFN APSSIVRAAV LYVLRTLLED AIPLNDGCLA
PVDLVIPEDS LLNPAPPAAV VAGNVETSQV VTDALFGALG VQAAAQGTMN NLTFGNADYQ
YYETIAGGAG AGPGYAGASA VQTHMTNSRL TDPEVLESRF PVRVECFAYR RGSGGQGRYA
GGDGVIRRLG FDQAMEVVLL ANRRRVPPFG IAGGGAGAPG EDSILRADGT REPMSACDRR
QIEPGDAIEI RTPGGGGYGD RRSDP
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