| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1840 |
|---|
| Symbol | |
|---|
| ID | 8807612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1954635 |
|---|
| End bp | 1955672 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_003461067 |
|---|
| Protein GI | 289209001 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.000670431 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGGA TGATGGAGTG GGCGGAGCAG GGACGCATGC CGGACTTGCT GGTCCGCGCG
GGGATCCGCC GGCTGCTGGC GGAGCGCCTG GCAGAGGTCT CCGGCACGGC CGAGGCGACC
ATGGAGCGGC GCTACGCCCT GATCGAGTCC ATGCGCGCGG CCCCGGTCGC CCTGTCCACC
GACATCGCCA ACGAGCAGCA CTACGAGATC CCCACCGCTT ATTTCGAGCA GTGCCTGGGT
CCGCGGCTCA AGTACTCCAG TGCCTGGTGG CCGGAGGGCG TCGACACCCT CGAGGCGGCC
GAGGTCGCGA TGCTGCGCCT GACCTGCGAG CGTGCGGGGA TTGCCGATGG CCAGCGGGTG
CTGGAACTGG GCTGTGGCTG GGGATCGCTG TCGCTGTGGA TGGCCGAGCA GTACCCCGGC
GCACGGATCA CCGCCGTCTC CAATTCCAGT ACCCAGCGGG CCTTCATCGA GGCCCGGCGC
GATGCCCTGG GGCTCGCGAA TCTCGAGGTC CTGACCGCGG ACATGAACAC GTTCGCCCCG
CCGGAGCCGG GCTTTGACCG GGCGGTCTCG ATCGAGATGT TCGAGCACAT GCGCAACTGG
CCGGAACTGC TGCGGCGCAT TGCCGGGTGG CTCAATCCCG GCGGGCGCTT CTTCATGCAT
GTGTTCGCCC ATCGCGAACA TGCCTATGTG TTCGAGTCCG AGGGCGAGCA TGACTGGATG
GGGCGGTACT TCTTCCGCGA CGGCCTGATG CCGTCGGACG ACCTCGCGCG GCACTTCCAG
GAGGACCTGC GGGTGATCCG CCAGTGGCGC GTCGGTGGGC AGCACTACGC CCGCACGATC
AACGCCTGGC TGGCCCGCCA GGATCGCGCC CGCGACACGC TGATGCCCCT GTTCGAGACG
GCCTATGGTG CACAGCAGGC GGCACTCTGG TTCCAGCGCT GGCGGATCTT CTACATGGCC
TGCGCGGAGC TGTTCGACTA CGGCGGCGGG GACGAGTGGT TCGTCTCCCA TGTGCTGTTC
GAGCGGCCGG GAGACTGA
|
|---|
| Protein sequence | MQRMMEWAEQ GRMPDLLVRA GIRRLLAERL AEVSGTAEAT MERRYALIES MRAAPVALST
DIANEQHYEI PTAYFEQCLG PRLKYSSAWW PEGVDTLEAA EVAMLRLTCE RAGIADGQRV
LELGCGWGSL SLWMAEQYPG ARITAVSNSS TQRAFIEARR DALGLANLEV LTADMNTFAP
PEPGFDRAVS IEMFEHMRNW PELLRRIAGW LNPGGRFFMH VFAHREHAYV FESEGEHDWM
GRYFFRDGLM PSDDLARHFQ EDLRVIRQWR VGGQHYARTI NAWLARQDRA RDTLMPLFET
AYGAQQAALW FQRWRIFYMA CAELFDYGGG DEWFVSHVLF ERPGD
|
|---|
| |