Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1838 |
Symbol | |
ID | 8807610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1952651 |
End bp | 1953430 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | septum site-determining protein MinC |
Protein accession | YP_003461065 |
Protein GI | 289208999 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00106899 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCGCCA CGCCGAGTCC CGTCCAGACC ATTGAACTGA AAGGGCGCAT GATGCTGGTG TCGGTACTGC GCGTGTTTCA GACCGATCCC CGGATGCTGG GCGAACAACT CGCCGCGCAC CGCGAACAGG CCCCGGACCT GATGCGCGAC ATGCCGATCG TGCTGGATCT CGAGCCGGTG GCCGAGTCCC CCGAGACGGA CCTTCAGGCA ACCATCGAAC AGGTGCGCGC CGAGGGCTTC AAGCTGATCG GCCTGCAGGC GGGCGAGGTC GCCGAGCGCC TGCAGAGCTA TTCCGAGTTG TTCGACGTGC TGCCCGTGCT GCAACTGGGC GGGCGTGGCG GCGCGCCCAG TGGCGAGGTG TCCCTGGAAG AGGACGAGGC CCCGGAGCCG CCGCCGAGCA GGAAGGGCAA GAAATCCGCG GACAACACGC CCGAGGCGAC CCCAGCCGTG CACAGCGCGA CCCGCGTCGT GGATCGGCCG GTGCGCTCCG GGCAGCAGAT CTATGCCCGA GGGGGCGACC TGCTGGTGAC CGGGGCGGTG TCCGCCGGGG CCGAGCTGCT GGCGGATGGG CACATCCATG TGCTGGGTCC GCTGCGCGGG CGGGCACTCG CCGGCGTGCG GGGCCTGGAG ACGGCTCGGA TCTTCTGCCG GCGACTGGAT GCGGAGCTGT TGTCCATCGC CGGGCATTAC CGGGTAGCCG AGGATATCGC CGAGTCCGAG CGCGGCGAGA ACCGGCTGGT GACACTCGCG GGCGAAAGCC TCAAGATCGC GGAAATCTGA
|
Protein sequence | MSATPSPVQT IELKGRMMLV SVLRVFQTDP RMLGEQLAAH REQAPDLMRD MPIVLDLEPV AESPETDLQA TIEQVRAEGF KLIGLQAGEV AERLQSYSEL FDVLPVLQLG GRGGAPSGEV SLEEDEAPEP PPSRKGKKSA DNTPEATPAV HSATRVVDRP VRSGQQIYAR GGDLLVTGAV SAGAELLADG HIHVLGPLRG RALAGVRGLE TARIFCRRLD AELLSIAGHY RVAEDIAESE RGENRLVTLA GESLKIAEI
|
| |