| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1822 |
|---|
| Symbol | |
|---|
| ID | 8807594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1937562 |
|---|
| End bp | 1938164 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function UPF0149 |
|---|
| Protein accession | YP_003461049 |
|---|
| Protein GI | 289208983 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0327059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0000000200071 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCC CCACCGGCGA ATCGACCAAG GCGCGCGGCG GCCTTGAATC CGACCCGGCC
GCGCTGGCCG AGCAGCTCGC GCATGGCCTG CGTCGCATGG GTTTCGCGCA GACGCCGGCC
TCGGCCCACG GGCTGTTTAC CGGCTGCGTG GTTGCGGACC CCGGCGCGGA TGTCGACGCG
CTGGAGCATA GCCTGGGCGA GGCGCTGCCG CTGACCGATG CCGCGCCGGA CGACTTCCGC
GCGACGGTGG AGGCCATCCG CCGGACCCTG CTGGCCCAGC TGTACGATGT CGAGCTCGGC
TTCGGGCCGC TGCTGCCCGA GGACGAGCCG ATCGAGGCGC GCGCCCAGGC GCTGTCGGAG
TGGGTCGACG GCTTTATCTC CGGCTTCGGG CAGATGCCCC GGCTGCAGCA GATGAAACCC
TCGGCCGAGG CCAGCGAGAT CCTGCGCGAC TTCGCCGAGA TCGCGCGCAT CGAACTGGAG
CCGGAGGACG ACGAAGAGAA CGCCGCCGCC TTCGAGGAAC TCAACGAGTA TGTACGCGTC
GGTGTACTGC TGATCGCCGA CGAGCTCGCC CCGGACGACC CGAAACGGAT CCCGATGCAA
TGA
|
|---|
| Protein sequence | MAAPTGESTK ARGGLESDPA ALAEQLAHGL RRMGFAQTPA SAHGLFTGCV VADPGADVDA
LEHSLGEALP LTDAAPDDFR ATVEAIRRTL LAQLYDVELG FGPLLPEDEP IEARAQALSE
WVDGFISGFG QMPRLQQMKP SAEASEILRD FAEIARIELE PEDDEENAAA FEELNEYVRV
GVLLIADELA PDDPKRIPMQ
|
|---|
| |