Gene TK90_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1820 
Symbol 
ID8807592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1934737 
End bp1935996 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content74% 
IMG OID 
ProductUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 
Protein accessionYP_003461047 
Protein GI289208981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00177812 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000175067 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCC AAACCCCCGA CATCGCCATC ATCGGCGGCG GCCCGGTCGG CAGTCTGGCG 
GCTGCGACCC TCTCGCGGGC TGGCTACTCC GTGGCCCTGT TCGAGCGTGG CGCTGCGCCG
AACGCCGGCA CCACGCGTCC CGACACCCGC GGCTACGCGC TGGCCGCCGG TTCGGTCCAG
ATGCTCGACG ATCTCGGCTA CTGGTCGTCC GTGGCCGAAC AGGCGAGCCC GATCCGCTCC
ATCGTCGTCA GCCGCCGCGG CGGGCTGGGG CGCGTCCACC TGAACGCCCG TGACCACGGC
CGCGCCGCGC TCGGGCAGGT CGTTCCGGCC GCCGCGCTCG ACCCGATGCT GCACGAGGCC
TGCCGCGCGG CCGGCGTCGA TCGGCATTAC GACGCGACCC TGGCCGGCCT CGACCCGGCC
GAAGGCGACC GGCGGACGCT GCACATCCGG GGAGCAAAGG GCGAGGCGGC CTGGTGCGCG
CGCCTGATCC TGGCGGCGGA CGGCGTGGGC TCCCCGACGC GCAAGGCCCT GGGCCTGCCG
GTGCAGCGCC TGCGTTACGA TGCCGACGCC CTGGTCTTCG ACGTGCGCCC GGACCGTCCG
CACAACGGCC AGGCCTTCGA GCGCTTTACC GACGAGGGGC CGCTGGCCCT GCTGCCGCAG
GCCGATGGCC GCATGAATGT CGTCTGGGTC GCGCCGCCGC CGACCTGCGA GCAGCGCCTG
GAGCAGACGG AGGCCGAACG CCTGCGCGAG TTGCAGGCCC GCTTTGGCTG GGCCCTCGGG
CGCCTGCGCC CGGCGGGGCC GGTCGTGCGC TTCCCGCTGG AGCGGGTCCA TGCGCCCCAG
CCGGTTGCGG AGCGCGCTCT ATTGCTCGGT AATGCGGCGC ATTCGGTCCA TCCGGTCGCG
GGGCAGGGGC TCAACCTGTC GCTGCGCGAT GTGGCGGGCC TGCTCGGTGC ACTGCGCACG
GGTCGACAAG CCGATGGCAC GCCGACCTTT GCCGCCGACC CGGGTGCGGC GGCCGTGCTG
GAGACCTATG CGAACGCTCG GCGACAGGAC GTAGGCAGTG TGGTGGCCGC CACCGATTTC
CTCGCTCGGG GCCTGATGCA TGCCGCCGGG CTGCGCGGTC ACGGGCTGGG GGCCGGCATG
ATGGCGGTCG ATCGCCTGCG CCCGGCGCGC GATGCGCTGG CCCGCTCGGC GATGGGCCTG
GGGCCGCTGC CGCGTCACAT GCTCGCCCAT CTGCCCGCAG CCGGGGAGGG TGCGGCATGA
 
Protein sequence
MSTQTPDIAI IGGGPVGSLA AATLSRAGYS VALFERGAAP NAGTTRPDTR GYALAAGSVQ 
MLDDLGYWSS VAEQASPIRS IVVSRRGGLG RVHLNARDHG RAALGQVVPA AALDPMLHEA
CRAAGVDRHY DATLAGLDPA EGDRRTLHIR GAKGEAAWCA RLILAADGVG SPTRKALGLP
VQRLRYDADA LVFDVRPDRP HNGQAFERFT DEGPLALLPQ ADGRMNVVWV APPPTCEQRL
EQTEAERLRE LQARFGWALG RLRPAGPVVR FPLERVHAPQ PVAERALLLG NAAHSVHPVA
GQGLNLSLRD VAGLLGALRT GRQADGTPTF AADPGAAAVL ETYANARRQD VGSVVAATDF
LARGLMHAAG LRGHGLGAGM MAVDRLRPAR DALARSAMGL GPLPRHMLAH LPAAGEGAA