| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1814 |
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| Symbol | |
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| ID | 8807586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1929571 |
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| End bp | 1930635 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | Outer membrane protein (porin)-like protein |
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| Protein accession | YP_003461041 |
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| Protein GI | 289208975 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000274803 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000000255936 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC AGATTCTCGC AGTCGCCGTT GCCGGCGCCT TCGCGGTCCC GGCCTTCGCC
GCCGCGGACT CCTCCGTCAC CCTGTTCGGT CAGCTGCAGA CGCAGATCGT CCACCACAGC
GGTGGCCCGT CCGACTTCGA CAGCGGCTTC CGCGTGCATG ACGCCGGTGG TGCTGGTAAC
CCGGTCGACG GCGCTAGCGC CAACCGCCTC GGCGTCATGG TCGATCATGA CCTGGGTAAC
GGCCTGTCCG CCATTGCCAA GTTCGAGCAG GATTTTAATA CCAGCGGCGG AGATGCCGGG
TTCAACTCCG GTGCCCGTGA CATCTACGTC GGTCTGGACG GCAACTTCGG CCGCGTGATC
GCCGGTCGCA TGGCTTCCCC GTTCGTCACC GCTGGCAAGG ACCCGCTGAA CGGTACCTTC
ATGCAGGCCC GTACCAACGG TGGGCGCATG GACCCGCAGC AGCTCGGTGG TCTGGGTGAA
GGTAACTACC TGGACCGTGG TATCCAGTAC AGCAACAGCT TCGGCATCAT GAGCATGAAC
GTTGCCGCGT TTGTTGATAA CGCGGACGAC AGCAACACCG CCTATGCCGG TCGCCTGAAC
TTCGATCTCA ATCCCGTCGA ACTTTATGTC GCCGGTAACT GGGCGGATGA CTACAGCGGG
CAGAGTGGCG CCCTCGACGG CGGTGACTTC CGCGCTTACA AGATCGGCGC CGACTGGCGT
GCCGGTCCGT TCCGCCTGGT TGGTGAAGCG ACCGACTTCA AGTGGAAGGA TGAAGCGGGT
GAGACTACCG GTGATGGTAA CACCTACTTC CTGTCGGGTA CCTACACGAT GGGTCGTAAC
GACTTCGTGC TGAACCTCGG TCACACTCGC AATGACGACG CCGGTAACGT CGACTACGCC
GCGATTGCCG TGAAGCACAA CTTCAGCAAC CGCGTGATGG CGTTTGCCGG TGTGTCCTAC
GCCGATTACG ACGATGACGC TCCGACCTAT GTCAGCCGTG CGGCCACGAT CGCGGACGGC
AACTCCTTCA CGGGTGTTGG CGGCGGTCTG CGGGTGTCCT TCTAA
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| Protein sequence | MKKQILAVAV AGAFAVPAFA AADSSVTLFG QLQTQIVHHS GGPSDFDSGF RVHDAGGAGN
PVDGASANRL GVMVDHDLGN GLSAIAKFEQ DFNTSGGDAG FNSGARDIYV GLDGNFGRVI
AGRMASPFVT AGKDPLNGTF MQARTNGGRM DPQQLGGLGE GNYLDRGIQY SNSFGIMSMN
VAAFVDNADD SNTAYAGRLN FDLNPVELYV AGNWADDYSG QSGALDGGDF RAYKIGADWR
AGPFRLVGEA TDFKWKDEAG ETTGDGNTYF LSGTYTMGRN DFVLNLGHTR NDDAGNVDYA
AIAVKHNFSN RVMAFAGVSY ADYDDDAPTY VSRAATIADG NSFTGVGGGL RVSF
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