| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1788 |
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| Symbol | |
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| ID | 8807560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1906582 |
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| End bp | 1907202 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | methylthioribulose-1-phosphate dehydratase |
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| Protein accession | YP_003461015 |
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| Protein GI | 289208949 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00210025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0224188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAAA GCCCCGAATT CCAGGCACAG GTACGCCTGC TGGCCGAAGC AGGACGTGAT
CTCTCGGCGC GCGGCTGGCT GCCCGCGCGC ACCGGGCACT TCTCCGCGCG CCTGGACGAC
CGGCATATCG CCGTCACCGC GCCCAATCGC GAGAAGAGCT TCCTCGACCG CCATGACTTC
CTGGTGGTCG ATCTCGACGG ACACGTGGTG GCCGGGACCG AAGAGCCCGC CCCGGAGACC
TTCCTGCACA TCATCATGTA CCGCCACGAC CCCCAGCTGG GGGCGGTGCT GCATACGCAC
TCGGTGCATG CGACGGTCCT GTCGCGTCAG TTCCCCGGCA CGCTCGCCCT GCGCGACTAC
GAGGTCCTGC GCGAACTGCC CGGGGTGGAA AACCCCTCCC GGGGCCTGAA CCTGCCCGTT
TTCGCGAACG AGCCCGATGT GCAGCAGCTC GCCGCACGCG TCGATGCCGC GATGAGCCGC
GAGCCCAACC TCGCCGGTTT CATGATCGGC GGCCACGGGC TCTACACCTG GGGCGCAAGC
GTGGAGCTGG CGCTGCACCG GGTCGAGGCC TTCGAATTCA TGTTCCAGTG CGAAACGCTC
GCGCACCAGA TGAGCCGATG A
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| Protein sequence | MDQSPEFQAQ VRLLAEAGRD LSARGWLPAR TGHFSARLDD RHIAVTAPNR EKSFLDRHDF
LVVDLDGHVV AGTEEPAPET FLHIIMYRHD PQLGAVLHTH SVHATVLSRQ FPGTLALRDY
EVLRELPGVE NPSRGLNLPV FANEPDVQQL AARVDAAMSR EPNLAGFMIG GHGLYTWGAS
VELALHRVEA FEFMFQCETL AHQMSR
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