Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1785 |
Symbol | |
ID | 8807557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1902327 |
End bp | 1902893 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | deoxycytidine triphosphate deaminase |
Protein accession | YP_003461012 |
Protein GI | 289208946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000678653 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0149108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA AGTCGGACCG CTGGATCCGG GAGATGGCCG AGACGAAGGG CATGATCGAG CCCTTCGAGC CCGGTCAGGT CCGCTATCAC GACGAGCAGC GCATCGTCTC CTACGGCACG TCCAGCTACG GCTATGACGT GCGCTGCTCG GACCATTTCA AGATCTTCAC CAACATCAAC TCGAGCATCG TCGACCCCAA GGGCTTCGAC GAGGGCAGCT TCGTGGATGT GCATTCGGAT GTCTGCATCA TCCCGCCCAA CTCGTTCGCG CTGGCGCATA CGGTGGAGTA CTTCCGCATC CCGCGTGATG TGCTGACGAT CTGTCTCGGC AAGTCGACCT ACGCGCGCTG CGGCATCATC GTGAACGTGA CTCCGCTGGA ACCCGAGTGG GAAGGCCATG TGACGCTGGA GTTCTCCAAC ACCACGCCGC TGCCGGCCAA GATCTACGCC AACGAGGGCG TGGCGCAGAT GCTGTTCCTG CAGTCCGACG AGGTCTGCGA GACCTCCTAC AAGGACCGCG GCGGCAAGTA CCAGGGCCAG CGCGGCGTGA CGCTCCCGCG CACCTGA
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Protein sequence | MSIKSDRWIR EMAETKGMIE PFEPGQVRYH DEQRIVSYGT SSYGYDVRCS DHFKIFTNIN SSIVDPKGFD EGSFVDVHSD VCIIPPNSFA LAHTVEYFRI PRDVLTICLG KSTYARCGII VNVTPLEPEW EGHVTLEFSN TTPLPAKIYA NEGVAQMLFL QSDEVCETSY KDRGGKYQGQ RGVTLPRT
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