Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1760 |
Symbol | |
ID | 8807532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1879522 |
End bp | 1880022 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | Domain of unknown function DUF1791 |
Protein accession | YP_003460987 |
Protein GI | 289208921 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.289316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.172768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAACC GTTCCTGCAC CCCCGCGTTG CTGTTGTGTC TGCTCGCCAG CCTGGCCTTG CTTGCCCTGC CGCTGAAGGC GGCCGCAGAC GACCAGATGC CCTGGGGCTC GGCCGAGATG ATGGACCGTG AATACGAACC ACGAAAGGTG GTCTATGACG TCTATGTGGA TACCGAAGAC GAGCTGAACA TGGTGCTCGA CCGTGTCAGC ATGTTGAACA ACGTCTACGA GTCCGATCCC TTCGAGGCCC ATATCGTACT GGTCCTGCAC GGCCGCGAGG TCCCGTTCTT CACCCGCGAC CAGTTCGAGG AACGCGAGGA AACCATGCGC CGTGCCAAGT CCCTGACCGA GGGTGGCGTG GTGGAATTTC GCATGTGCGA GGCCTCCGCC CGGCTGCGCG GCATCGACCA CGAAGACGTC CACGGCTTCG TGAACCTGGT GCCCATGGCT GACGCCGAGA TCATCGAACT GCAGCACGAG GGCTATCTGC TGATGCAGTG A
|
Protein sequence | MKNRSCTPAL LLCLLASLAL LALPLKAAAD DQMPWGSAEM MDREYEPRKV VYDVYVDTED ELNMVLDRVS MLNNVYESDP FEAHIVLVLH GREVPFFTRD QFEEREETMR RAKSLTEGGV VEFRMCEASA RLRGIDHEDV HGFVNLVPMA DAEIIELQHE GYLLMQ
|
| |