| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1750 |
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| Symbol | |
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| ID | 8807522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1868419 |
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| End bp | 1871109 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | diguanylate cyclase with PAS/PAC and GAF sensors |
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| Protein accession | YP_003460977 |
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| Protein GI | 289208911 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.42554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTTG CGGCATGGCC AGCCGGCCTG TCGGCCATAG GCGTCCTGCT CCTTTGCTGC
ACCGGCGTGC AGGCCGACGA ACCGCCACCT CCCCTGATCG TCTCCCAGGA TCACGCCTGG
CCCCCCTTTG CCTTCGAAGA TAACGGGGGC GAGCCTCGCG GCTTGCTGGT AGACCTGTGG
CAGGAGATCG CGAACGAACT CGACCGTCCA GTGGAATTCC GACTGGTCGA CTGGCCGCGC
ACCCTGGATC TCGTCCGCGG TGGCGAGGCT GATGTGCACG GCGGGCTGAT CCAGTCTCCC
GAGCGCGAAC AAACCCTGGC CTTCAGCGAA GTACTGCTCC CGCTGCGGAC CTTCGCGTTC
GTGCGCACCG GCGCGCCCGT GGCCCGACTG GACGAACTCG CGCACAAACC GGCTGGCGTG
GTGGCGGGCA GCTTCGAACT CGAGTTCATG CGGCGCGAAC GACCTGAACA CCCGCTGCAG
GTCTTCGACA ACAACGAGCA GATGGTGCGC GCCGCGCTGG AAGGCACGAT CGATGTCTTC
GTGGGCGACT ACCCGGTCGC CATGTACCTG CTGGACCGTC ATGGCGAGCC GGGCATGTTT
CACCCCCTGG AGCTGCTCTA CGAGCAGCCC CTGCGCGCAG CGGTAACGCA CGCTAACGAG
GAATTGCTGG ACGAAATCAA CACGGCCATC GCCCAGCTGG ATGACGAACT GCTGCGCCAG
ATCACGCAGC GCTGGATCCA CTCCGATACG GTCGAGGTGT TCCCCGCCTG GCTGCTCCCA
ACCGTCATTG GCCTGAGCCT GCTGGCGGTA TTGCTGTATG CCGCATTGCT GCTTCGCCAG
CGGCGTGCGC TCGAGACCCG CGTTCGCGAG CGCACCGCCG AACTCGAGGA CGAGCGCGAG
CTGTTCCGCA CCCTGACCGA ACACGCTGCG GCCGGCGTAT TCATCCTCCA GAATGACCAT
TTCCAGACCG TGAATCCGGC CCTTTCCCGC ATCCTCCAGC GCCCCGAACA CTGGCTGCTG
AACCAGCCCT TCTACGAGAT CATCCACCCG GAACAGCGCG AGGCCGTGAC TCAGCGGGCT
CGCGACCGGA TCGCGGGCAA GAAGGTGCCG GACCACTACG AGATGAAGGT CATCACCGGT
AACGGCGAGA CGCGCTGGGT CGAGCTGACC GCCGGCCGCG TGGAGCTGCA AAGCGGCGCG
GCCAGCATTG GCACGATATA CGACATCACC GAGCGGCACC TGCTGGAGGA ACAGTTGCGC
GCCAGCGAGG CCCAGTACCG CCAGCTGGTC GAGAACATCG GGGACATCAT CTACACCCTC
ACGCCGGACG GCGTCATCAC CTATGTCTCC CCGCAATGGA CACGAGTGCT GGGTTACACC
GCCGAAGAGG CGACCGGAAC CCCCATCGCC GACTACGTCC ATCGGGAGGA CCGCGGGGAA
TGCGGCCGCT TCCTCCAACG CACCCTCCGT TCGGAGCAGA ACGACCAGGA AATCGAGTAC
CGCGTCCGGC ATCAGAGTGG GGAATGGCGC TGGCACGTCT CCAGCGGCGC CCCGATCCGC
AGCGCGACGG GCGAGATCAC AGGCTATGTG GGCGTTGCTC GAGACATCAC CGATCGCCGC
CGCATGCACG ACGAGCTTCA GTATCAGGCA CGTTTCAACG CCATGCTGGC GCGCCTGTCC
TCGGACTTCG TGACCGCCAG CGCCGACTTG ATGGACGAGC GACTGGATGC TGCCCTGGCC
GACATCGGGC GCTTTTTCGA GAGCGATCGC TGCTATCTGT TCGAGTTATC ACCTGATGGC
ACACACATGG ACAACACCCA TGAATGGTGT GCCCCCGGCG TATTCTCCGT AATGGACCAA
CTGCGGGATG TGGACATCAA AAAGCTACCC TGGTGGCGCA CCCGCATGCT GGAGATGATC
GAGCAGCGCA TACCGGTGGT GATTCCCGTG GTGGACGAGC TCCCGGAGGA GGCGGCCACC
GAGCGCGAGT TGTTCCGGCG ACAAGGCGTC AAGACCCTGA TCTGCGTACC CATCCTGGCC
GGACAGCAGG TCACCGGCTT CGTCGGCATG GACATGCTGC GCCCGCGCAC CTGGCGCAAG
GATCAGGATG AATTGCTGCT GGTGCTCGGC AACCTGATCT CGGAGGCACT GCAGCGCAAC
CACCTGGAGA TCCAGCTACG CGATCTTGGG ATCACCGACC CGTTGACCGG CCTGTACAAC
CGCCGCTACC TGATGGAGCG CCTGCGCGAA CAGATCGAGG CCTGGCGCCG CCACGGCGAA
GATTTTGCCG TGGCGATCCT GGATCTGGAC CACTTCAAGA CCCTCAATGA CACCCACGGA
CACCTGGCCG GCGACGAGGT TCTGCGCAAC TTCGGCGATC TGTTGCGGCG CCAGCATCGG
GCCTTCGACA TTGTGGCTCG CTTTGGCGGC GAGGAATTCA TCGTGGTCCT CACCCGTGTC
GATCACGAGG CCGCCACCAC CGCCATCGAA CGCCTGCTGG AGGCCACCCG CGAACTCGAC
ACACGCTTCG AGGACGAATC GCTGGCCTTC ACGGTCAGCG CCGGACTGGC CTGGTCCGAC
GAGTGCGACC CCGGGCACCT CACGCCCGAA ACCCTGATCA ATCGGGCCGA CGATCGTCTC
TATCGCGCGA AGGCTCAGGG CCGCGACCGG CTTGTGGCCG GAGACACGTA A
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| Protein sequence | MRFAAWPAGL SAIGVLLLCC TGVQADEPPP PLIVSQDHAW PPFAFEDNGG EPRGLLVDLW
QEIANELDRP VEFRLVDWPR TLDLVRGGEA DVHGGLIQSP EREQTLAFSE VLLPLRTFAF
VRTGAPVARL DELAHKPAGV VAGSFELEFM RRERPEHPLQ VFDNNEQMVR AALEGTIDVF
VGDYPVAMYL LDRHGEPGMF HPLELLYEQP LRAAVTHANE ELLDEINTAI AQLDDELLRQ
ITQRWIHSDT VEVFPAWLLP TVIGLSLLAV LLYAALLLRQ RRALETRVRE RTAELEDERE
LFRTLTEHAA AGVFILQNDH FQTVNPALSR ILQRPEHWLL NQPFYEIIHP EQREAVTQRA
RDRIAGKKVP DHYEMKVITG NGETRWVELT AGRVELQSGA ASIGTIYDIT ERHLLEEQLR
ASEAQYRQLV ENIGDIIYTL TPDGVITYVS PQWTRVLGYT AEEATGTPIA DYVHREDRGE
CGRFLQRTLR SEQNDQEIEY RVRHQSGEWR WHVSSGAPIR SATGEITGYV GVARDITDRR
RMHDELQYQA RFNAMLARLS SDFVTASADL MDERLDAALA DIGRFFESDR CYLFELSPDG
THMDNTHEWC APGVFSVMDQ LRDVDIKKLP WWRTRMLEMI EQRIPVVIPV VDELPEEAAT
ERELFRRQGV KTLICVPILA GQQVTGFVGM DMLRPRTWRK DQDELLLVLG NLISEALQRN
HLEIQLRDLG ITDPLTGLYN RRYLMERLRE QIEAWRRHGE DFAVAILDLD HFKTLNDTHG
HLAGDEVLRN FGDLLRRQHR AFDIVARFGG EEFIVVLTRV DHEAATTAIE RLLEATRELD
TRFEDESLAF TVSAGLAWSD ECDPGHLTPE TLINRADDRL YRAKAQGRDR LVAGDT
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