| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1700 |
|---|
| Symbol | |
|---|
| ID | 8807472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1817769 |
|---|
| End bp | 1818902 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1568 |
|---|
| Protein accession | YP_003460928 |
|---|
| Protein GI | 289208862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0414346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC CCCGCTCGTC CCTCGTGTCT ATCAAGGACA CGCCCTGGTA CCACGTCGTC
TCCCGCTGCG TTCGGCGCGC CTTTCTCTGC GGCGAGGATC GCGTATCCGG ACACAACTTC
GAGCATCGCC GCGAATGGAT CGAGACGCGG ATCCTGGAGC TGGCGGCGAT CTTCACCATT
GATGTCGCAG CCTATGCGGT GATGAGCAAT CACTATCACG TTGTAGTTCG ACTGGACCCC
GAGCGGGCGG CCGCGCTGGA TACCGAGTCC GTCCTGCGTC GCTGGACGCG CCTGTTCTCT
GGCCCCGAGT TGGTTAGACA GTACCTGTCG CCTCGGCGGA AGGCGATGTG CGCCGCACAG
GTTCGGCGGG TCGAGGAATA CGCCCAAACC TATCGGGCCC GACTGGCCGA TCTGTCGTGG
TTCATGCGCG TGTTGAACGA GTCCATTGCC CGACAGGCCA ACGAGGAGGA AGGCATCAAG
GGACGATTCT GGGAGGGCCG CTTCAAGAGT CAGGCGCTGC TGGATGATGC CGCCGTGCTG
ACGGCCATGA GCTACGCGGA CCTGAACCCG ATCCGGGCCG GGATGGCCGA GACGCTGGAC
GAGAGTGACC ACACGTCACT GCAACGGCGT CTCCGCCAGG AGGGGACCGA GGCAGACGCA
CAGACCGGGG CAGTTGCGAC TCCAAATGGG CCCCAGCCAT GCGGTCCACC AGATGCCTTG
CGCCCGGAGA ATGAGCTTCG ATCGCTTCCC CAGGCGCCCC TGATGCCGTT TGATGCAACC
GGGCAGTTCG AACCGGCTAT TCCGTTCGCA TTCGAGGATT ACCTGGAGCT GACCGATACG
CTGGGGCGTT GCGTCCACCC CACGAAACGG GGATGGATTC CGGCGCACCG TCCTCGCCTG
CTAGACCGCT TGAGCATGGA TGCCGAGACT TTTATCCAGC AATCCAGCAG TCTATTGCGC
GCGTTCGGAT CGGCGATTGG CGCACCAGAG CAGTTGGTGG ATTTGGCCGC GCGCAGACAG
TGCCGCTACC TGCGCGGGAT GTCCATGGCT CGGGCGCTGT TCGCCCGCCC CGCCGCTTTG
GCGCCGCACC TCACACTCCA ACGCAGGTTT CGGGCCAGGC ATTCGGGTTT GTGA
|
|---|
| Protein sequence | MTQPRSSLVS IKDTPWYHVV SRCVRRAFLC GEDRVSGHNF EHRREWIETR ILELAAIFTI
DVAAYAVMSN HYHVVVRLDP ERAAALDTES VLRRWTRLFS GPELVRQYLS PRRKAMCAAQ
VRRVEEYAQT YRARLADLSW FMRVLNESIA RQANEEEGIK GRFWEGRFKS QALLDDAAVL
TAMSYADLNP IRAGMAETLD ESDHTSLQRR LRQEGTEADA QTGAVATPNG PQPCGPPDAL
RPENELRSLP QAPLMPFDAT GQFEPAIPFA FEDYLELTDT LGRCVHPTKR GWIPAHRPRL
LDRLSMDAET FIQQSSSLLR AFGSAIGAPE QLVDLAARRQ CRYLRGMSMA RALFARPAAL
APHLTLQRRF RARHSGL
|
|---|
| |