Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1689 |
Symbol | |
ID | 8807461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1807677 |
End bp | 1808405 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003460920 |
Protein GI | 289208854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0942959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGATC AGACGATGCA TCCCCAGCGA CCGCTCGGCA GCCCGGTGCT CGCCATGAGT GGAGTGGCCT TCGGCTACCC CGGCGAGGGT CGCGTGCTGC ATGACGTGGA GCTGGCGCTG GCACCCGGCG AGCGCGTGGC GATCGTCGGC GAGAGTGGCA CCGGCAAATC CACGCTGTTG CACCTGGCGG CCGGGCTGGA GCCGGCCGAC ACCGGCACGG TGGAACTGGC CGGTCAGGCG CTGGCGGGGC TGGACGAGGC GGCGCGTACG CGGCTGCGCC GAGCGCAGGT TGGGATCGTG TTTCAGTCGT TTCATCTGAT CCCGACGCTC ACGGCGCTGG AGAACGTGAT GCTGCCGCTG GAGCTGGCGA CGGATCTGGA TGCCGCTCAG CGCCGTGAGC GGGCTGCGGC GCAGCTGGCA GCCGTGGGGC TCGCGGACAA GGGCGGGCGC GAACCGGAGC AGCTATCCGG CGGCGAGCAG CAGCGCGTGG CGATCGCACG GGCGCTGGTG CACCGGCCGG CGCTGATCCT GGCCGACGAG CCGACCGGCA ACCTCGACTC GCGCACCGGC GAGGCGGTGT TCGGCCTGCT GCTGGAACAG GTGCGCGCGA CCGGCTGCGC GCTGTTGCTG GTTACGCATA GCGATGACCT GGCCGGGCGT CTGGACCGGG TGCTGCGCAT GCAGGACGGC CACCTGCAGG ATCTCGCCGC GGAAGCCTCG GCGACGTGA
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Protein sequence | MQDQTMHPQR PLGSPVLAMS GVAFGYPGEG RVLHDVELAL APGERVAIVG ESGTGKSTLL HLAAGLEPAD TGTVELAGQA LAGLDEAART RLRRAQVGIV FQSFHLIPTL TALENVMLPL ELATDLDAAQ RRERAAAQLA AVGLADKGGR EPEQLSGGEQ QRVAIARALV HRPALILADE PTGNLDSRTG EAVFGLLLEQ VRATGCALLL VTHSDDLAGR LDRVLRMQDG HLQDLAAEAS AT
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