Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1687 |
Symbol | |
ID | 8807459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1803863 |
End bp | 1804855 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_003460918 |
Protein GI | 289208852 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.133517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCATA TTGGCGTTGA TGTTAGCAAG AACAAGCTCG ACTGCATGTG GGTCCGGGAT CTGGAGGCGG GCAAGGTGAA GCCCAAGGTG TTCCCGAACC GCCAAGACCA GTACCGGGAG CTGCTGCACT GGCTCGAGCG CAACACCGGC GAGACCCCCG AGGGGCTCCA TGTGTATCTG GAGGCCACCG GCATCTACCA CGAGCCGCTG GCGTACTGGC TTCATGATCA GGGGGTGCAG GTCCACGTGC TGAACCCGGC CCAGGTGCGT TCGCATGCCA AGGGCATGGG GGTGCGCAAC AAGACCGACC GCAAGGACAG CATGATGCTG GCCCGCTACG GCATCGAACG CGCACCACGA CGCTGGCAGC CCGAACCGCC GGAGGTGCGG GAACTCAAGC GCCTGCTCAG CCGCCTGGAG GCTCTGGAAC AGGATATGCG GCGCGAAGAG AACCGCCTGG AGAAGGCGCG TTTCAGTGAG GACACCCTCG CTCAGGCGTC GATCGACAAC GTCCTGCAGG CCCTGCGTGA GGAACACCGT CGGCTCCAGC AGCAGATCGA CGATCACTTC GACGCCCATC ACCACCTGAA GCGGGATCGG ACCTTGCTGG AGAGCATCCC CGGCATCGGC CGCGTGCTGT CGGCCTCGAT GACCGCAGCG CTGCGCAGCC GCGCGTTCAC GAGCGCTCGA CAAGCGGCGG CGTTCCATGG GCTGGCACCG GTCCTGGAAG AATCGGGGAC CACGGTCCGG CGGCCCTCGC GGTTGGCGAA GATCGGTTCC AGCCGACTGC GCAAGGCGCT CTACATGGCG GCGGTGGTGG CGACCCGGTA CAACCCGGAC GTGCGACACC AGCATCAACG TCTGCTGACA CGCGGCAAGG CCAAGATGTC GGCGATCGGG GCGGCTATGC GCAAACTCCT GCACATCGCC TTCGGTGTGC TCAAATCCCA AACCCCGTAT CAAGCCCGCC ATGAAACCCC TTGCACCCCG TAG
|
Protein sequence | MAHIGVDVSK NKLDCMWVRD LEAGKVKPKV FPNRQDQYRE LLHWLERNTG ETPEGLHVYL EATGIYHEPL AYWLHDQGVQ VHVLNPAQVR SHAKGMGVRN KTDRKDSMML ARYGIERAPR RWQPEPPEVR ELKRLLSRLE ALEQDMRREE NRLEKARFSE DTLAQASIDN VLQALREEHR RLQQQIDDHF DAHHHLKRDR TLLESIPGIG RVLSASMTAA LRSRAFTSAR QAAAFHGLAP VLEESGTTVR RPSRLAKIGS SRLRKALYMA AVVATRYNPD VRHQHQRLLT RGKAKMSAIG AAMRKLLHIA FGVLKSQTPY QARHETPCTP
|
| |