| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1666 |
|---|
| Symbol | |
|---|
| ID | 8807438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1784912 |
|---|
| End bp | 1785928 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003460897 |
|---|
| Protein GI | 289208831 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.993525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCG CCTGGTGGGT CGTCCTCGTC GCCTTCTGGC TGGCCGCCTG CGCCGGCAGT
CCGCCGCAAC CGCCCGCGGA CGAGGCCCCG GATGAACGCC CGGACGCCGA GGTCCTCGAA
GCCGCGGACG GGACCCGCCT CCCGCTGCAC CGCTGGGGCC CGGAAGAGCC CCGCCGGGTT
GCGCTGGCCC TGCACGGTTT CAACGACCAT GGCGGCAGCA TGGCGGCGCT GGGCGAGGCC
CTGGCCGAGC ACGAGATCGC CGTCTACGCC TATGACCAGC GGGGCTTCGG CGCCAACCGC
GATGTCGGCC ATTGGGCGGG CTACCAGACG ATGGCCGAGG ACGCCCGCAC CGGGCTGCGC
ATCCTCGCCG AACGCTATCC CGACAACCCG CCCTACCTGA TCGGCAAGAG CATGGGCGGG
GCAGTGGCCC TGCTGGCCAC CAGCGGCGAA GAACTGCCGG CGATGCGCGG GACAGCCCTG
ATCGGTCCGG CCGTCTGGAG CCGTGACCAA ATGCCCTGGT ACCAGCGCTT CGGCCTCTGG
GTTGGTGCCC GCATTGCCCC CGGCATGCGC CTGACCGGCG AGATGGCAGC GGAATTCGAT
ATCCGGCCCA CCGATGACCC GGCGGTCCTG GAACAGATGC GCGATGACCC ACTGGTCCTG
CGCGAGGCCC GCATCGACGC CCTCGACGGA CTGACCACGC TGATGGGTCG CGCGCTGAGC
GCCGGAGACG CCCTCCCCGC CCCAAGCCTG CTGCTCTACG GTGCGAAGGA CGACCTCGTG
CCACCCGGGC CCACGGCGGT GCTGGCCGAA CGCCTGGCCG CAACCGGCGA CCCCGGCCAC
CGCATGGTGC TCTATCCCGA GGGCTACCAC ATGCTCACAC GCTACACCCG TTCCGTGGAC
ACCTTTGGCG ATCTCGTCGC CTGGATGCTG GACCCCGAGG CCACCCTACC CTCCGGCCAC
GAACGCGCCC CCGAGACCAT GGTGCAGAAC CTGCAAGATC TCGACGCGCA ACGTTAA
|
|---|
| Protein sequence | MMRAWWVVLV AFWLAACAGS PPQPPADEAP DERPDAEVLE AADGTRLPLH RWGPEEPRRV
ALALHGFNDH GGSMAALGEA LAEHEIAVYA YDQRGFGANR DVGHWAGYQT MAEDARTGLR
ILAERYPDNP PYLIGKSMGG AVALLATSGE ELPAMRGTAL IGPAVWSRDQ MPWYQRFGLW
VGARIAPGMR LTGEMAAEFD IRPTDDPAVL EQMRDDPLVL REARIDALDG LTTLMGRALS
AGDALPAPSL LLYGAKDDLV PPGPTAVLAE RLAATGDPGH RMVLYPEGYH MLTRYTRSVD
TFGDLVAWML DPEATLPSGH ERAPETMVQN LQDLDAQR
|
|---|
| |