| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1652 |
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| Symbol | |
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| ID | 8807424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1771806 |
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| End bp | 1773266 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | blue (type 1) copper domain protein |
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| Protein accession | YP_003460883 |
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| Protein GI | 289208817 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00373533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCGCC ACGATCGGGG TATGCACCTC GTGGCCTGGT GCGTGATCGG ACTGTTCTGG
TGGGTGGCCT CTGCGGCGCA GGCTTCACCG GGGCCGGACT TCAGCGAGCG GTTCGGTGAC
AGCGACTTCA TCGAGATCAT CGAACGCGAC GAGGGGCTGG AGACGCGGCC GACCGGGTAC
GTCTCGCAGG ATATCGAGCC GGATCATGTG TTCAGGATCG ACCTCAACGA GGGTCAGGTG
CCGATCGGGC AGGGCGTCGT CTACGACGGC TTCCTGATCG ACGGCAAACT GCCGGGGCCC
ACCCTGCGTG TCACCGAGGG CGACATTGTG CGCATGGAGA TCACCAATAG CGGGGCGGTG
ATGCACGGGG CGTCCTTCCA TGCCGCCTAT ACCCAGACCT CCAAGCACGT CGGTTCCATC
ATGCCGGGGC AGACCAAGTC GATCACCTTC CGCGCGACGA CGCCGGGGGT CTTCATGTAT
CACTGCGCTC CGGGTGGCCA TGCCATCCCC ATGCACGTGA TGTTCGGCCA GTACGGGATG
ATGGTGGTCG AGCCGCGCGA GGAGCCCTAC CAGCTGGAAG CGGACCTGGG GCAGGAGCCG
GATCTGAAGC TCTACATGCT GCAGCACGAG CTGTACGCCA GCGGCAAGGA AGCGGTGGAA
GGCGATCCCA GCTACACCGC CTTCAATGGC GAGCTGTTCC GCTACGTGGA AAACCCGATC
CCGGTGCGCC CGGGCGACTA CGTGCGCATG TATTTCCTGA ACGTGGGGCC CAACCTGCTC
TCGACCTTCC ATATCGTCGG CATCGTCTGG GACTACGTGT ACTGGCAGGG GCATCCCGCG
GCCATGTGGC CCGGCGGGCA GACGGTCACC GCGGGCCCCT CGGACTCCTG GGTGATCGAG
TTCCGGATAC CCCCGGAGGA GGGCGTCTAC ACCATGCTGG ATCATGGCGT GGGGGGTACC
AGTCGCGGTG CCATCGGGCT GCTGGATGCC CGTGCGGACG CCGATACGCC TTCCGAGATC
CTGGCCGAGG GCCCGTCCTA CGAGCCGGCG GAGCGGGAAG AGCGGATGGG TGAAGCGCGG
CGGATCCTTT CACCATTCGG CATCCCCGAC TCCGATGCCA ACCCGGTTCC CGCGCGGGCG
GATCGGCCGG TTCGGTTCGG GTCCGACGTC GAGGAAGTCG TGATCGAGAT GAAGGGCAAT
GCCTTCTACC CGAAGATCGT CGAGGTGGCG CCGGGCACGA AGATCACCTG GGTCAACGAG
GACGTCTTCA CCTACGGGCA CGGCGAGACA TCCGGTGCCC ACAACGCGGT GGCCCTGAGC
GGTCCGCAGT CGTTCGCCAC TGCGTTGCTG GCACACGCCG AGAGCGACAG CGTGACCCTG
ACCGAGCCGG GAACCTACGA CTACATCTGC GCCCCGCACC CCTACATGCA GGGCCGCATC
ATCGTGCGCG ACACGGACTG A
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| Protein sequence | MGRHDRGMHL VAWCVIGLFW WVASAAQASP GPDFSERFGD SDFIEIIERD EGLETRPTGY
VSQDIEPDHV FRIDLNEGQV PIGQGVVYDG FLIDGKLPGP TLRVTEGDIV RMEITNSGAV
MHGASFHAAY TQTSKHVGSI MPGQTKSITF RATTPGVFMY HCAPGGHAIP MHVMFGQYGM
MVVEPREEPY QLEADLGQEP DLKLYMLQHE LYASGKEAVE GDPSYTAFNG ELFRYVENPI
PVRPGDYVRM YFLNVGPNLL STFHIVGIVW DYVYWQGHPA AMWPGGQTVT AGPSDSWVIE
FRIPPEEGVY TMLDHGVGGT SRGAIGLLDA RADADTPSEI LAEGPSYEPA EREERMGEAR
RILSPFGIPD SDANPVPARA DRPVRFGSDV EEVVIEMKGN AFYPKIVEVA PGTKITWVNE
DVFTYGHGET SGAHNAVALS GPQSFATALL AHAESDSVTL TEPGTYDYIC APHPYMQGRI
IVRDTD
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