| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1637 |
|---|
| Symbol | |
|---|
| ID | 8807409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1755993 |
|---|
| End bp | 1758407 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Type I site-specific deoxyribonuclease |
|---|
| Protein accession | YP_003460868 |
|---|
| Protein GI | 289208802 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000133951 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGG CCGGCCTCAA TGAGGCAGAC ACGCGCGCCG AACTGATCGA CCCGGCCTTG
AAGGAGGCGG GCTGGGGCGT GGTGGAGGCC AGCCGGGTGC GGCGCGAGGT GATCACCCTC
GGGCGACTGC AGGGTGGCGG CAAGCGTGCC AGGCAGGACA TCGCCGACTA CGTGCTGACC
TATCGCGGCC AGAAGCTGGC GGTGATCGAG GCCAAGAAGC GCAGCCTGCC GGTGAGCGAG
GGGCTGGCCC AGGCTAAACG CTATGCCGAG CGCCTGCAGG CGCGCTTCGC CTACGCCACC
AATGGCGACG GCATCTACCG GGTGGACATG ACGACCGGTG TGGAAGGCGC GGTGGATGCC
TGGCCCGCGC CGGATGAGCT GTGGGTGGAG ACCTTCGGCG CGAGTGTTGG CGCGCAGGAC
ACCTGGCGGG AGCGCTTCGG GGCCGTGCCG TTCGAGGACA AGGGCGGCTT CTGGCAGGCG
CGCTACTACC AGTACAACGC CATCAATCAG GCGCTGGAGG CGGTTGCCGC GGGACGGGAC
CGCATTCTGC TGACCCTGGC CACCGGCACC GGCAAGACGG CCATCGCCTT CCAGATTGCC
TGGAAGCTGT TCCATGCCCG CTGGAGCCTG GCGGCGCGTG CTGCCGGCAC GCCGGGGCGG
CAGCCGCGCA TCCTGTTTCT GGCGGACCGC AACATCCTCG CCAATCAGGC CTTCAACGAC
TTTTCCGCCT TTCCCGAGGA TGCGCTGGTG CGCATCGATC CGGAGGTGAT CCGCAAGAAA
GGCCGGGTAC CGAAGAACGG CAACGTGTTC TTCACCATCT TCCAGACCTT CATGACCGGG
CGCGATGCCG AGGGCCACTC GGCGCCCAAC TTCGGCGACT ACCCGCCGGA CTTCTTCGAT
TTCATCATCA TCGACGAGTG CCACCGGGGC GGCGCCAACG ACGAGAGCAA CTGGCGCGGC
ATCCTGGAGT ATTTCCAGCC CGCCGTGCAG CTTGGCCTGA CCGCCACGCC CAAGCGCACG
CACAACGCCG ACACCTACGC CTACTTCGGC GAGCCGGTCT ACATCTACTC GCTGAAGGAA
GGCATCAACG ACGGCTTCCT GACGCCGTTC AAGGTGCGGC AAATCGCCAC CACGCTGGAT
GACTACGTCT ACACGGCGGA TGACGAGATC ATCGAGGGCG AGGTGGAGCA AGGGCGGCGC
TACACCGAGG AGGACTTCAA CCGCGTCATC GAAATCACCG AGCGCGAGCG CTACCGCGTG
AAGCTGTTCA TGGAGCAGAT CGACCCGCGC GAAAAGACGC TGGTGTTCTG CGCCACTCAG
GAACACGCGC TGGCCGTGCG CGACCTGATC AACCAGCTCA AGACCAGCAA AGACCCCCAC
TACTGCGAGC GCGTCACCGC CAACGACGGC AAGGAGGGCG AGCGTTTCCT GAAGCAGTTC
CAGGACAACG AGAAGACCAT CCCGACCATC CTCACCACCT CGCAGAAGCT GTCCACCGGC
GTGGATGCCC GCAACGTGCG CAACATCGTG CTGATGCGGC CGGTGAACAG CATGATCGAG
TTCAAGCAGA TCATCGGACG CGGCACGCGC CTGTTTGAGG GCAAGGACTA CTTCACGATC
TACGACTTCG TGAAGGCCTA CGAGCACTTT AACGATCCGG AGTGGGATGG CGAGCCCTTA
CCGCCCGAAC CCTGCGAGCG ATGTGGCAAC AGCCCTTGTA GTTGCACTAC GGAGCCTCCG
CAGCCCTGCC CTGTTTGCGG CGAGCGGCCT TGTGTTTGCG AGAAGGAGCC GCCGGACCCC
TGCGAGGTCT GTGGCGAATG GCCCTGCATC TGCGAGAAAC GGCGCAAGGT GAAGATCCGC
CTGGGCGACG GCAAGGAACG CGCCATCCAG CACATGACCG CTACCAGCTT CTGGGGGCCG
GACGGCAAGC CCATTTCTGC CGCTGAATTC ATCCAGCGAC TATTCGGGGA TCTGCCAGAG
CTCTTCCAGG ACGAAGATGA GCTTCGCCGC CTGTGGAGCC GCCCGGATAC CCGCAAGAGT
CTGCTGGAGG GACTGGAGGA GAAGGGCTAC GGCACGCAAC AGTTGGCCGA GGTCGGCAAG
CTGATCGAGG CCGAAAACAG CGATCTATAC GATGTGCTGG CCTACATCGC CTTCAACATG
GCGCCGGTCA CCCGGGCCGA ACGAGTGGAT GCCCACAAGG AGCGCATCTT CCAGGGACAC
GACTACAGGC AGCAGGAATT CCTGCGATTC GTGCTCGATC ACTATGTCGC CCAGGGCGTG
AGCGAACTGG ATACGGCGAA GCTCCCCCAA CTGATCGAAT TGAAGTACCA CAGCCTCGGT
GATGCGGTGC ACGAGCTAGG GCCGGTGAGC AACATTCGAG AAGTGTTCGT GGACTTTCAG
CAGTATTTGT ACTGA
|
|---|
| Protein sequence | MNEAGLNEAD TRAELIDPAL KEAGWGVVEA SRVRREVITL GRLQGGGKRA RQDIADYVLT
YRGQKLAVIE AKKRSLPVSE GLAQAKRYAE RLQARFAYAT NGDGIYRVDM TTGVEGAVDA
WPAPDELWVE TFGASVGAQD TWRERFGAVP FEDKGGFWQA RYYQYNAINQ ALEAVAAGRD
RILLTLATGT GKTAIAFQIA WKLFHARWSL AARAAGTPGR QPRILFLADR NILANQAFND
FSAFPEDALV RIDPEVIRKK GRVPKNGNVF FTIFQTFMTG RDAEGHSAPN FGDYPPDFFD
FIIIDECHRG GANDESNWRG ILEYFQPAVQ LGLTATPKRT HNADTYAYFG EPVYIYSLKE
GINDGFLTPF KVRQIATTLD DYVYTADDEI IEGEVEQGRR YTEEDFNRVI EITERERYRV
KLFMEQIDPR EKTLVFCATQ EHALAVRDLI NQLKTSKDPH YCERVTANDG KEGERFLKQF
QDNEKTIPTI LTTSQKLSTG VDARNVRNIV LMRPVNSMIE FKQIIGRGTR LFEGKDYFTI
YDFVKAYEHF NDPEWDGEPL PPEPCERCGN SPCSCTTEPP QPCPVCGERP CVCEKEPPDP
CEVCGEWPCI CEKRRKVKIR LGDGKERAIQ HMTATSFWGP DGKPISAAEF IQRLFGDLPE
LFQDEDELRR LWSRPDTRKS LLEGLEEKGY GTQQLAEVGK LIEAENSDLY DVLAYIAFNM
APVTRAERVD AHKERIFQGH DYRQQEFLRF VLDHYVAQGV SELDTAKLPQ LIELKYHSLG
DAVHELGPVS NIREVFVDFQ QYLY
|
|---|
| |