| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1625 |
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| Symbol | |
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| ID | 8807397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1740858 |
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| End bp | 1744379 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_003460858 |
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| Protein GI | 289208792 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.158099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCAGT CCGGCGATCT GCAGCCAGGG ATGGTGGTGC TGCACGGCAA CCATCTGGAG
TCGCTGCGTG CCCTGGTGGT CGAGTGGATG CAGCGCGCGC CGCTCGGCCC GCTGGAGAAC
GAGACTCTGC TGGTGCAGAG CAACGGCATG GCGCAGTGGC TGCGCTATGC CCTGGCCGCG
CATCCGGATG CCGATCCGCC CGGCTGTGGC ATCGCCGCCG CGCTGGACAT GCAGCTGCCG
TCGCGCTTTG TCTGGTCGGC CTACCGGGCG GTGCTCGGGC CGGAGGCCGT GCCGCTGGAA
TCGCCGTATG CCAAGCGCCC GCTGATCTGG CGTCTGATGC GCCTGCTGCC GGAGTGCCTC
GCGCGTCCGG AGTTCGCCCC GCTGGCGCGC TTTCTTGCCG ACGATGACCC GCGCGACGGC
GGCGACCTGC GCAAGCGCCA CCAGCTCGCC GAACGTCTGG CCGACCTGTT CGACCAGTAC
CAGGTCTATC GTGCCGACTG GCTGACCTCC TGGGCCACCG GGCGCGATGT CCTGCGCGAC
GCGCGTGGCC GCGAGACCCC GCTGGCGGAG GGCGATCGCT GGCAGGCCGC GCTGTGGCGC
CTGCTGCGCG AGGACATCGG CGAGGGCCCG GCCGACACCA GCCGGGCCAC GGTCCACGCC
CGCTACCGCG AGGCCGTGCA GGGCCTGAGC GAGCGCCCGC CGGGCCTGCC ACGGCGGCTG
ATCGTGTTCG GCATCTCCTC GATGCCCGGG CAGATCCTCG AGGCGCTGGA GGGGCTGGCG
GGCGTGTGCC AGATCCTCGT CTGCGTGCAC AACCCCTGCG AGCACTACTG GGCCGACATC
GTCGCCGACA AGGACCTGCT GCGCGCGACG CGCCAGCGCC AGGCGCGCAA GGCCGGGATG
CCCAGCGTGC TGGACGACGC CGAGCTGCAC CAGCATGCGC ACCCGCTGCT GGCCGCCTGG
GGCAAGCAGG GCCGCGACTA CATCGGCCTG CTGGACGAAC ACGACGACCC CACTGCCTAC
GACGCGGTGC TGCGTACCCT CGCCTGGAAG CGGGTCGACT ACTTCGAGCC GCACGGCGGC
GACTGCCTGC TGCACCAGCT GCAGGACGAC ATCCGCGAAC TGCGCCCGCT GGGCGAGACC
CGCGAGAGCT GGCCGGCCGT GGCGCCGGAC GACGACTCCA TCCAGTTTCA TGTCGCCCAT
GGCCCGTTGC GCGAGGTGGA GATCCTGCAC GACCGGCTGC TCGCGCACTT CGACGCCGAC
CCGGACCTGC GCCCGCGCGA CGTGATCGTG ATGGTCCCGG ACATCGACGC CTACGCCCCG
CACATCGAGG CCGTGTTCGG CCAGCTCCCG CCGGACGACC CGCGCTACAT CCCCTACACC
CTGTCCGACC AGGGGCCGCG CGGGCGCGAC CCGGTGCTGA TCGCGCTGGA GCGCCTGCTG
TCGCTGCCGG AGAGCCGGAT GGGCGTGGCC GAGGTGCTGG ACCTGCTGGA TGTGCCGGCG
CTGCGCCGGC GATTCGGGAT CGCCGAAGAA GACCTGACCA CCCTGCACCG CTGGGCCGAG
GGGGCGGGGG TGCGCTGGGG CCTGGATGCC GAGCAGCGCG CGGGGCTTGG CCTGCCGGAG
GGGCTGGAGC AGAACACCTG GCGCTTCGGC CTGCGCCGGA TGCTGTTGGG CTATGCATCC
GGGGGCGCGG GGGCCTGGCA GGGGCTGGAG CCGTTCGACG AGATCGGTGG AATCGAGGCC
GCCCTGCTGG GGCCGATGGA TGACCTGATC ACCGCACTGA CGCAGACGTG GGACTGGCTG
CGCCATGCCC ATACCCCTGG CGAATGGAAT ACCCGGCTGC GCGAACTGCT GGATACCTTC
TTTGCCGGCG AGACCGATGC CGAACTGTTC ACGCTGGGGC GCCTGCGCGA GGCGCTGGAC
CAGTGGCAGG CCGACTGCGC AGAGGCGGAA CTGGACGACC CCCTGCCGCT GGGCGTCGTG
CGCGAGCAGT GGCTGGCCAG CCAGGAGGAC AGCGGGCTGG GGCAGCGCTT CCTGGCCGGC
TCGGTGAACT TCGGCACGCT GATGCCGATG CGCGCGATCC CGTTTCGCAT CGTCTGCCTG
CTGGGCATGA ACGACGGCGA CTATCCGCGC AGCCCGACGC CGGTGGACTT CGACCTGATG
CGCCGCGACT ACCGCCCGGG CGACCGCTCG CGGCGCGAGG ACGACCGCTA CCTGTTTCTG
GAGGCATTGC TGTCCGCGCG GCGGCAGCTG CATGTGAGCT GGGTGGGCCA CAGCGCGCGC
GACAACGAGT CGCAGCCGCC CTCGGTGCTG GTCGCGCAGC TGCGCGATCA CCTGGCCGCC
GGCTGGCGGC TCCAGGGCGC CGAGGAGGCC GGTGCTCCGA GCAGGGACGA CCCGCTGCTG
GACCATCTGA CCACCGAGCA CACCCTGCAG CCGTTCTCGC CGGCCAATTT CCCGCCCGAC
CCGGCGCAGG CCCGGTACTT CACCTACGCG CGCGAGTGGG AGGCGGTTCA CCACGGCGAC
GAGACCCCGG CGCCGGGCGC AATCGAACTG CCACCGCCGG ACGCAGCCGA CGACGAACGC
GTGCTGGGCC CGGATGCGCT GATGCGTTTC CTGCGCGACC CGGCGGAGGC GTTCTTCCGC
CATCGGCTGG GCGTGGTGTT CGATCGCGAA GAGGCCCCGA GCGAAGATCT GGAGCCCTTT
GCACTGGCCG GGCTGGAGCA GTGGCAGGTG CGCGAGGCCC TGGTCGCGGC CGCGCTGGAC
CACGGCGAGG ACCCCGAGGC CTGGGGCCCG GTGCTGGAGG CCGAGGCCGC GCGGCTGCAG
CGCACCGGTG CGTTGCCGCT GGGTGCCGCC GGCGAGCTGG AACGCGACGC GATGATCGCC
GAGTCCGGGC GTCTGCTGGA GCGTATCGGC CTGCGTCTGG CGGCCTGGCC GGAGCGGCTG
CCGCCGGTGC CCGCGGTGCG TCTGGGGCAG GGGGGCTGGA CGCTGGAGGG GGCCGGCCCC
GCCCTGCGTG GCGCGGCCGG GCAAGCCGTC TATCTGGACT ACACCGTGAG CAAACTGAAA
CAGAAAAAGG ACTGGCGGGT GGACAAGCTG GCCAAGCCCT GGCTCGAACA CCTGCTGGCA
AACCAGGGCG CGGGCGAAGG CGGACCGGTC GCCACCGAGG TGATCGGGCT GGATACCGCG
CTGCACCTGC CGGGTCTGGG GCCGGAGCAG GCCCGCGAGC ACCTCGGGGC CCTGGTCGAG
GGCTGGGCGG CCGGCCTGGA ACGCCCGTTG CCGGTGGCCT GCGCCACGGC CTTCGCCTGG
CTGCAGGCCG AGGCGAAGGA CGATCCCGAT CCGCTGGCGC GGGCGCGCAA GATGCTGGTC
GGGGACGACT TCAGCCCCGG TGAATGGGCC CGGAGCCCGG CGCTGGCGCG TGCCTGGCCG
GACCCGGAGG CGCTGCTGCA GGACCCGGCG TTCGGGCACT GGCGCGACCG GCTGTACCGG
CCGCTGTTCG AGGCGCTGGC CGCCGGGGAG GCGATGGAAT GA
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| Protein sequence | MTQSGDLQPG MVVLHGNHLE SLRALVVEWM QRAPLGPLEN ETLLVQSNGM AQWLRYALAA
HPDADPPGCG IAAALDMQLP SRFVWSAYRA VLGPEAVPLE SPYAKRPLIW RLMRLLPECL
ARPEFAPLAR FLADDDPRDG GDLRKRHQLA ERLADLFDQY QVYRADWLTS WATGRDVLRD
ARGRETPLAE GDRWQAALWR LLREDIGEGP ADTSRATVHA RYREAVQGLS ERPPGLPRRL
IVFGISSMPG QILEALEGLA GVCQILVCVH NPCEHYWADI VADKDLLRAT RQRQARKAGM
PSVLDDAELH QHAHPLLAAW GKQGRDYIGL LDEHDDPTAY DAVLRTLAWK RVDYFEPHGG
DCLLHQLQDD IRELRPLGET RESWPAVAPD DDSIQFHVAH GPLREVEILH DRLLAHFDAD
PDLRPRDVIV MVPDIDAYAP HIEAVFGQLP PDDPRYIPYT LSDQGPRGRD PVLIALERLL
SLPESRMGVA EVLDLLDVPA LRRRFGIAEE DLTTLHRWAE GAGVRWGLDA EQRAGLGLPE
GLEQNTWRFG LRRMLLGYAS GGAGAWQGLE PFDEIGGIEA ALLGPMDDLI TALTQTWDWL
RHAHTPGEWN TRLRELLDTF FAGETDAELF TLGRLREALD QWQADCAEAE LDDPLPLGVV
REQWLASQED SGLGQRFLAG SVNFGTLMPM RAIPFRIVCL LGMNDGDYPR SPTPVDFDLM
RRDYRPGDRS RREDDRYLFL EALLSARRQL HVSWVGHSAR DNESQPPSVL VAQLRDHLAA
GWRLQGAEEA GAPSRDDPLL DHLTTEHTLQ PFSPANFPPD PAQARYFTYA REWEAVHHGD
ETPAPGAIEL PPPDAADDER VLGPDALMRF LRDPAEAFFR HRLGVVFDRE EAPSEDLEPF
ALAGLEQWQV REALVAAALD HGEDPEAWGP VLEAEAARLQ RTGALPLGAA GELERDAMIA
ESGRLLERIG LRLAAWPERL PPVPAVRLGQ GGWTLEGAGP ALRGAAGQAV YLDYTVSKLK
QKKDWRVDKL AKPWLEHLLA NQGAGEGGPV ATEVIGLDTA LHLPGLGPEQ AREHLGALVE
GWAAGLERPL PVACATAFAW LQAEAKDDPD PLARARKMLV GDDFSPGEWA RSPALARAWP
DPEALLQDPA FGHWRDRLYR PLFEALAAGE AME
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