Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1625 |
Symbol | |
ID | 8807397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1740858 |
End bp | 1744379 |
Gene Length | 3522 bp |
Protein Length | 1173 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_003460858 |
Protein GI | 289208792 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.158099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCAGT CCGGCGATCT GCAGCCAGGG ATGGTGGTGC TGCACGGCAA CCATCTGGAG TCGCTGCGTG CCCTGGTGGT CGAGTGGATG CAGCGCGCGC CGCTCGGCCC GCTGGAGAAC GAGACTCTGC TGGTGCAGAG CAACGGCATG GCGCAGTGGC TGCGCTATGC CCTGGCCGCG CATCCGGATG CCGATCCGCC CGGCTGTGGC ATCGCCGCCG CGCTGGACAT GCAGCTGCCG TCGCGCTTTG TCTGGTCGGC CTACCGGGCG GTGCTCGGGC CGGAGGCCGT GCCGCTGGAA TCGCCGTATG CCAAGCGCCC GCTGATCTGG CGTCTGATGC GCCTGCTGCC GGAGTGCCTC GCGCGTCCGG AGTTCGCCCC GCTGGCGCGC TTTCTTGCCG ACGATGACCC GCGCGACGGC GGCGACCTGC GCAAGCGCCA CCAGCTCGCC GAACGTCTGG CCGACCTGTT CGACCAGTAC CAGGTCTATC GTGCCGACTG GCTGACCTCC TGGGCCACCG GGCGCGATGT CCTGCGCGAC GCGCGTGGCC GCGAGACCCC GCTGGCGGAG GGCGATCGCT GGCAGGCCGC GCTGTGGCGC CTGCTGCGCG AGGACATCGG CGAGGGCCCG GCCGACACCA GCCGGGCCAC GGTCCACGCC CGCTACCGCG AGGCCGTGCA GGGCCTGAGC GAGCGCCCGC CGGGCCTGCC ACGGCGGCTG ATCGTGTTCG GCATCTCCTC GATGCCCGGG CAGATCCTCG AGGCGCTGGA GGGGCTGGCG GGCGTGTGCC AGATCCTCGT CTGCGTGCAC AACCCCTGCG AGCACTACTG GGCCGACATC GTCGCCGACA AGGACCTGCT GCGCGCGACG CGCCAGCGCC AGGCGCGCAA GGCCGGGATG CCCAGCGTGC TGGACGACGC CGAGCTGCAC CAGCATGCGC ACCCGCTGCT GGCCGCCTGG GGCAAGCAGG GCCGCGACTA CATCGGCCTG CTGGACGAAC ACGACGACCC CACTGCCTAC GACGCGGTGC TGCGTACCCT CGCCTGGAAG CGGGTCGACT ACTTCGAGCC GCACGGCGGC GACTGCCTGC TGCACCAGCT GCAGGACGAC ATCCGCGAAC TGCGCCCGCT GGGCGAGACC CGCGAGAGCT GGCCGGCCGT GGCGCCGGAC GACGACTCCA TCCAGTTTCA TGTCGCCCAT GGCCCGTTGC GCGAGGTGGA GATCCTGCAC GACCGGCTGC TCGCGCACTT CGACGCCGAC CCGGACCTGC GCCCGCGCGA CGTGATCGTG ATGGTCCCGG ACATCGACGC CTACGCCCCG CACATCGAGG CCGTGTTCGG CCAGCTCCCG CCGGACGACC CGCGCTACAT CCCCTACACC CTGTCCGACC AGGGGCCGCG CGGGCGCGAC CCGGTGCTGA TCGCGCTGGA GCGCCTGCTG TCGCTGCCGG AGAGCCGGAT GGGCGTGGCC GAGGTGCTGG ACCTGCTGGA TGTGCCGGCG CTGCGCCGGC GATTCGGGAT CGCCGAAGAA GACCTGACCA CCCTGCACCG CTGGGCCGAG GGGGCGGGGG TGCGCTGGGG CCTGGATGCC GAGCAGCGCG CGGGGCTTGG CCTGCCGGAG GGGCTGGAGC AGAACACCTG GCGCTTCGGC CTGCGCCGGA TGCTGTTGGG CTATGCATCC GGGGGCGCGG GGGCCTGGCA GGGGCTGGAG CCGTTCGACG AGATCGGTGG AATCGAGGCC GCCCTGCTGG GGCCGATGGA TGACCTGATC ACCGCACTGA CGCAGACGTG GGACTGGCTG CGCCATGCCC ATACCCCTGG CGAATGGAAT ACCCGGCTGC GCGAACTGCT GGATACCTTC TTTGCCGGCG AGACCGATGC CGAACTGTTC ACGCTGGGGC GCCTGCGCGA GGCGCTGGAC CAGTGGCAGG CCGACTGCGC AGAGGCGGAA CTGGACGACC CCCTGCCGCT GGGCGTCGTG CGCGAGCAGT GGCTGGCCAG CCAGGAGGAC AGCGGGCTGG GGCAGCGCTT CCTGGCCGGC TCGGTGAACT TCGGCACGCT GATGCCGATG CGCGCGATCC CGTTTCGCAT CGTCTGCCTG CTGGGCATGA ACGACGGCGA CTATCCGCGC AGCCCGACGC CGGTGGACTT CGACCTGATG CGCCGCGACT ACCGCCCGGG CGACCGCTCG CGGCGCGAGG ACGACCGCTA CCTGTTTCTG GAGGCATTGC TGTCCGCGCG GCGGCAGCTG CATGTGAGCT GGGTGGGCCA CAGCGCGCGC GACAACGAGT CGCAGCCGCC CTCGGTGCTG GTCGCGCAGC TGCGCGATCA CCTGGCCGCC GGCTGGCGGC TCCAGGGCGC CGAGGAGGCC GGTGCTCCGA GCAGGGACGA CCCGCTGCTG GACCATCTGA CCACCGAGCA CACCCTGCAG CCGTTCTCGC CGGCCAATTT CCCGCCCGAC CCGGCGCAGG CCCGGTACTT CACCTACGCG CGCGAGTGGG AGGCGGTTCA CCACGGCGAC GAGACCCCGG CGCCGGGCGC AATCGAACTG CCACCGCCGG ACGCAGCCGA CGACGAACGC GTGCTGGGCC CGGATGCGCT GATGCGTTTC CTGCGCGACC CGGCGGAGGC GTTCTTCCGC CATCGGCTGG GCGTGGTGTT CGATCGCGAA GAGGCCCCGA GCGAAGATCT GGAGCCCTTT GCACTGGCCG GGCTGGAGCA GTGGCAGGTG CGCGAGGCCC TGGTCGCGGC CGCGCTGGAC CACGGCGAGG ACCCCGAGGC CTGGGGCCCG GTGCTGGAGG CCGAGGCCGC GCGGCTGCAG CGCACCGGTG CGTTGCCGCT GGGTGCCGCC GGCGAGCTGG AACGCGACGC GATGATCGCC GAGTCCGGGC GTCTGCTGGA GCGTATCGGC CTGCGTCTGG CGGCCTGGCC GGAGCGGCTG CCGCCGGTGC CCGCGGTGCG TCTGGGGCAG GGGGGCTGGA CGCTGGAGGG GGCCGGCCCC GCCCTGCGTG GCGCGGCCGG GCAAGCCGTC TATCTGGACT ACACCGTGAG CAAACTGAAA CAGAAAAAGG ACTGGCGGGT GGACAAGCTG GCCAAGCCCT GGCTCGAACA CCTGCTGGCA AACCAGGGCG CGGGCGAAGG CGGACCGGTC GCCACCGAGG TGATCGGGCT GGATACCGCG CTGCACCTGC CGGGTCTGGG GCCGGAGCAG GCCCGCGAGC ACCTCGGGGC CCTGGTCGAG GGCTGGGCGG CCGGCCTGGA ACGCCCGTTG CCGGTGGCCT GCGCCACGGC CTTCGCCTGG CTGCAGGCCG AGGCGAAGGA CGATCCCGAT CCGCTGGCGC GGGCGCGCAA GATGCTGGTC GGGGACGACT TCAGCCCCGG TGAATGGGCC CGGAGCCCGG CGCTGGCGCG TGCCTGGCCG GACCCGGAGG CGCTGCTGCA GGACCCGGCG TTCGGGCACT GGCGCGACCG GCTGTACCGG CCGCTGTTCG AGGCGCTGGC CGCCGGGGAG GCGATGGAAT GA
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Protein sequence | MTQSGDLQPG MVVLHGNHLE SLRALVVEWM QRAPLGPLEN ETLLVQSNGM AQWLRYALAA HPDADPPGCG IAAALDMQLP SRFVWSAYRA VLGPEAVPLE SPYAKRPLIW RLMRLLPECL ARPEFAPLAR FLADDDPRDG GDLRKRHQLA ERLADLFDQY QVYRADWLTS WATGRDVLRD ARGRETPLAE GDRWQAALWR LLREDIGEGP ADTSRATVHA RYREAVQGLS ERPPGLPRRL IVFGISSMPG QILEALEGLA GVCQILVCVH NPCEHYWADI VADKDLLRAT RQRQARKAGM PSVLDDAELH QHAHPLLAAW GKQGRDYIGL LDEHDDPTAY DAVLRTLAWK RVDYFEPHGG DCLLHQLQDD IRELRPLGET RESWPAVAPD DDSIQFHVAH GPLREVEILH DRLLAHFDAD PDLRPRDVIV MVPDIDAYAP HIEAVFGQLP PDDPRYIPYT LSDQGPRGRD PVLIALERLL SLPESRMGVA EVLDLLDVPA LRRRFGIAEE DLTTLHRWAE GAGVRWGLDA EQRAGLGLPE GLEQNTWRFG LRRMLLGYAS GGAGAWQGLE PFDEIGGIEA ALLGPMDDLI TALTQTWDWL RHAHTPGEWN TRLRELLDTF FAGETDAELF TLGRLREALD QWQADCAEAE LDDPLPLGVV REQWLASQED SGLGQRFLAG SVNFGTLMPM RAIPFRIVCL LGMNDGDYPR SPTPVDFDLM RRDYRPGDRS RREDDRYLFL EALLSARRQL HVSWVGHSAR DNESQPPSVL VAQLRDHLAA GWRLQGAEEA GAPSRDDPLL DHLTTEHTLQ PFSPANFPPD PAQARYFTYA REWEAVHHGD ETPAPGAIEL PPPDAADDER VLGPDALMRF LRDPAEAFFR HRLGVVFDRE EAPSEDLEPF ALAGLEQWQV REALVAAALD HGEDPEAWGP VLEAEAARLQ RTGALPLGAA GELERDAMIA ESGRLLERIG LRLAAWPERL PPVPAVRLGQ GGWTLEGAGP ALRGAAGQAV YLDYTVSKLK QKKDWRVDKL AKPWLEHLLA NQGAGEGGPV ATEVIGLDTA LHLPGLGPEQ AREHLGALVE GWAAGLERPL PVACATAFAW LQAEAKDDPD PLARARKMLV GDDFSPGEWA RSPALARAWP DPEALLQDPA FGHWRDRLYR PLFEALAAGE AME
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