| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1624 |
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| Symbol | |
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| ID | 8807396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1737139 |
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| End bp | 1740861 |
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| Gene Length | 3723 bp |
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| Protein Length | 1240 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_003460857 |
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| Protein GI | 289208791 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.547512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.545211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGG GCGCGCAGCC GCTGGCGCTG ATGGAACTGC CGCTGCACGG CAGCCGCCTG
ATCGAGGCCA GTGCCGGCAC CGGCAAGACC TACACCATCG CCGCGCTGTA TCTGCGGCTG
GTGCTGGGCC ACGGCGAGCT GCCGGAGGGT ACCGGCGAGC TGACCCCGCC GCAGATCCTG
GTGATGACCT TTACCGAGGC CGCCACCCGC GAGCTGCGCG AACGCATCCG CGCCGTGCTG
GCGCGCGGGG CGCGCATCCT GCGCGGCGAA CCGGCCCCGG CCCACGAGGC GTTGTGGCCG
GCGCTGCTGG ACGCCTACCC GGAGCCGGCC GCCCGCGCCG GGGCCGCGCG ACGGCTGGAG
CTGGCCGCCG AGTGGATGGA CGAGGCGGCG GTCTCGACCA TCCACGGGTG GTGCTATCGC
ATGCTGCGCG AGCATGCCTT CGACAGCGGC AGCCTGTTCA ACCAGCGCCT GGAGGCGGAC
CAGGGGGAGC TGGTGGCCGA GGCGGCGCGT GACTACTGGC GCCGCTTTGT CTATCCGCAG
CCGGCGGATC ACCTGCGTCT GCTGCGCCAG GCCTTTGGCG AGGGGCCCGA CGATCTCCTG
GCCAAGGTGC GGCCCCTGCT CGGGCATCTG TCGGACACGG TGGGGCTGGA GCCGTACCGG
ACGCCGGACG GATTGTACGC CGAGCTGGCC ACGCGCCTGG CGCGCCTGGC CGAGCTGAAG
GCGGTCTGGC GCGAGGATGC CGCCGAGGTG GAACGCCAGT TCCGCGCCCT GCATGCCAGC
GCGCTGAATC GCCAGCAATA CCAGAAGCCG GATGACCTGA TCGCGGCGAT GCACGCCTGG
GCCGAGGACC CGGCCGCGCT GCTGCCGGAG AAGGTTGGCG GTACCCCGGT GCTGGAGCGC
ATGTGCGAGC AGGGCGTGGG CGAGCGGCTG AAGAAGGGGC AATCGCTGCC GGATGACCTG
CACCCGGCCT TCGTCGCGCT GAATGCCGCG CCCGAGGTCT GCGCGGACGA CAGCGAACGC
CTGCTGCAGG CGGCGTCCGT GGAGATCGAT CGCCAGTTCC GCCAGGCCCA GCGCGTGCGG
GTGCAGATGG GTTTCAACGA CCTGCTGCTG CGTCTGCGCG ATGCCCTGGA CGGCCCTGGT
GGCGAGGCGC TGGCCGAGAC GCTGCGGCGT CAGTTCCCGG TCGCCCTGGT GGACGAGTTC
CAGGACACCG ACCCGGTGCA GTACCGCATC CTGGAACGCG TCTATCGCAT CGAGGACAAC
CCGGCCGAGC AGGGCCTGCT CCTGATCGGC GATCCGAAGC AGGCGATCTA CGGCTTTCGC
GGCGCGGACA TCCACAGCTA TCTGAAGGCA CGGCGTGCGA CCGCCGGACG GCACTACACC
CTGCCGCGCA ACTTCCGCTC GACCGCGCGC CTGGTTGGCG CGGTGAACCG CCTGTTCGCC
CACGCCGACG GCTGGCCGGA GGGGGCCTTC CTGTTCGGCC AGGGCGATGC CGGCGAGCTG
CCGTTTCACC GGGTGGACGC CCAGGATCGC GGTGAGCGTC TGGAACACGA CGGAGCCGAG
GTGCCGGCGC TGACCCTGTG GTGCACGGAC CCGGGCACGT CGGTCGGCAC GGGCGTCTAT
CGCGAACAGA TGGCCGCTGC GGCGGCCGAG CAGATGGTGC GCCTGCTCAA TGGCGGGGCG
GACGGGACCT GCGGGTTTCG CGATGGTGAG GGGTGGCGGC CGGTTCGCCC GCGGGATATC
GCCGTGCTGG TGCGCGGCCG GGTGGAGGCG CGGTTGATGC AGGAGGCGCT GCGCGCGCGG
GGGGTGCGCA GCGTGTACCT GTCGGAGGGG GAGTCGGTCT TTGCCACCCC GGAGGCCGGG
GACCTGCTGC GCTGGCTGCG GGCCTGTGCC GAGCCGACCA GCGAGCGCCT GCTGCGCGCG
GCGCTGGCGA CCCCGACGCT GGGGCAGTCG CTGGCCGATC TGCACCGGCT GACCACCGAC
GAGCTGCGCT GGGAGCACCG CGTCGAGCAG TTCCGCGAGT ACCGCCGCCT GTGGCAGACG
CGCGGTGTGC TGCCGATGCT GCGCCGTCTG TTGCACGACT TCGATGTCCC GCGCCGGCTG
TTGGCCAGTG CCGATGGCGA GCGCGCGCTG ACCAACCTGC TGCACCTGAG CGAACTGCTG
CAGCGCGCGG CCGCCGAGCT GGATGGCGAA CAGGCCCTGA TCCGGCACCT GATCGAGCAC
CGCGAGGGCG AGCGGGCGGC GGCGGACGAG CAGGTACTGC GCCTGGAGAG CGACGAGGAC
CTGGTCAAGG TGGTCACGCT GCACAAGTCC AAGGGGCTGG AGTACCCGCT GGTGTTCCTG
CCGTTTGTCT GCGCGTTTCG CGCGGTCGAC CCGAAGAAGG ACGTGCCGCG GATCGACCGC
CCGCCGGGTG GCAGGCCGCG CTGGATCTTT CGTATGGACA GCCGTGCCCA GGAGCGCGCC
GATCGCGAGC GCCTGGCGGA GGACCTGCGC CTGCTGTATG TGGGCATGAC CCGCGCGCGC
CACGCCTGCT GGATGGGGCT GGCGCCGATT GTGTCGGGGC GGGGTAAAGA GAACGAGCTG
CACCGCAGCG CGGTCGGCTA CCTGCTGAAC GGCCCGGAGC CGATGCCGAA CGGCGAGCTG
GAGGACCGGC TGCAGGAGGC CCGTGGTGAC GAGTCCGCGA TTGCGATCGA ACCCCTGCCC
GAGATCATGG GCACGAGCGT GCGGCTGGCG CAGCAGACGG CGGCCCTCGG GCGGGCCCGC
ACCCCGACAC GCCCGGTACG CGAGCCCTGG TGGGTGGCCA GCTACAGCGC CATCGCACAC
CCGGACGAGG CCCATGCGCC GGCCCCGCTG GTTGCCGACC CGGTGGCCCC GGATTCCGCG
CTGGAGGACT TGCTGCGCGA ACGTGCGGAG ACTCCCGGTG CCGGGGCGGA TCCGTCCCAC
GGGGTGTCGC GGCCCGAGGT GCCGGTGGCC GGCGGGTTGC ACGACTTTCC GCGCGGGCCC
GCGCCGGGGA CCTTCCTGCA CGGCCTGCTG GAATGGGCGG CGGAGCAGGG CTGGGAGGCC
GTGGTCACTG ACCGCGCCCG GCTGGACGAC GAGGTGCGAA GGCGCTGCGA GCAACGCGAC
TGGGGTGACT GGGCGCCCGT CGTGCAGGAC TGGATGCGCC GGCTGATCAC GGCCGAGTAC
GCGCTGGCCT CCGGCGGCTC GTTCCGTCTG GACGAGCTGG GCGTGTATCA GCCGGAGCTC
GAGTTCCTGT TCGAGACGCG CTGGCTGCAA AGCCGGCGGC TGGATGCCGC CGTGTGCGAG
CAGCTACTGC CCGGACAGGC GCGGCCACCG GCGGGCGACC GGCTGTTGAA CGGCATGCTC
AAGGGTTTTG TCGATCTCGT CTTCGAGCAC GAGGGCCGCT ATTACGTCGC GGACTACAAG
TCCAACTGGC TGGGGCCCGG CCCCGACGCC TACGGGCCCG AGCGCCTGCG CGACGCGGTG
CTGGAACACC GCTATGACCT GCAGCTGGTG ATCTACACCC TGGCCCTGCA TCGCCAGCTG
CAGGCGCGGA TGCCGGGGTA CGACTACGAC CGTCACATGG GGGGCGGGGT GTACCTGTTC
CTGCGCGGAA TCGATGCGCC CGGAAGGGGC GTGTTCCATG ACTGCCCGCC ACGGGCACTG
ATCGAGCAGC TGGACGGCTG GTTCGCCGAG GGGCCGGACC GGCCGCGGGA GGCGCGGGCA
TGA
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| Protein sequence | MSAGAQPLAL MELPLHGSRL IEASAGTGKT YTIAALYLRL VLGHGELPEG TGELTPPQIL
VMTFTEAATR ELRERIRAVL ARGARILRGE PAPAHEALWP ALLDAYPEPA ARAGAARRLE
LAAEWMDEAA VSTIHGWCYR MLREHAFDSG SLFNQRLEAD QGELVAEAAR DYWRRFVYPQ
PADHLRLLRQ AFGEGPDDLL AKVRPLLGHL SDTVGLEPYR TPDGLYAELA TRLARLAELK
AVWREDAAEV ERQFRALHAS ALNRQQYQKP DDLIAAMHAW AEDPAALLPE KVGGTPVLER
MCEQGVGERL KKGQSLPDDL HPAFVALNAA PEVCADDSER LLQAASVEID RQFRQAQRVR
VQMGFNDLLL RLRDALDGPG GEALAETLRR QFPVALVDEF QDTDPVQYRI LERVYRIEDN
PAEQGLLLIG DPKQAIYGFR GADIHSYLKA RRATAGRHYT LPRNFRSTAR LVGAVNRLFA
HADGWPEGAF LFGQGDAGEL PFHRVDAQDR GERLEHDGAE VPALTLWCTD PGTSVGTGVY
REQMAAAAAE QMVRLLNGGA DGTCGFRDGE GWRPVRPRDI AVLVRGRVEA RLMQEALRAR
GVRSVYLSEG ESVFATPEAG DLLRWLRACA EPTSERLLRA ALATPTLGQS LADLHRLTTD
ELRWEHRVEQ FREYRRLWQT RGVLPMLRRL LHDFDVPRRL LASADGERAL TNLLHLSELL
QRAAAELDGE QALIRHLIEH REGERAAADE QVLRLESDED LVKVVTLHKS KGLEYPLVFL
PFVCAFRAVD PKKDVPRIDR PPGGRPRWIF RMDSRAQERA DRERLAEDLR LLYVGMTRAR
HACWMGLAPI VSGRGKENEL HRSAVGYLLN GPEPMPNGEL EDRLQEARGD ESAIAIEPLP
EIMGTSVRLA QQTAALGRAR TPTRPVREPW WVASYSAIAH PDEAHAPAPL VADPVAPDSA
LEDLLRERAE TPGAGADPSH GVSRPEVPVA GGLHDFPRGP APGTFLHGLL EWAAEQGWEA
VVTDRARLDD EVRRRCEQRD WGDWAPVVQD WMRRLITAEY ALASGGSFRL DELGVYQPEL
EFLFETRWLQ SRRLDAAVCE QLLPGQARPP AGDRLLNGML KGFVDLVFEH EGRYYVADYK
SNWLGPGPDA YGPERLRDAV LEHRYDLQLV IYTLALHRQL QARMPGYDYD RHMGGGVYLF
LRGIDAPGRG VFHDCPPRAL IEQLDGWFAE GPDRPREARA
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