| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1620 |
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| Symbol | |
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| ID | 8807392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1728941 |
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| End bp | 1730428 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003460853 |
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| Protein GI | 289208787 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.596211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAGGA CGCTGTTGGG GGTTTCTGCG GCCGCGCTGC TGGCCGGGTG TGCGGTCGGG
CCGGACTACG AGCGCCCGGA GGTCACGCTC CCGGACGAGT GGCCGGAGGA GATCGGTGAC
CAGATGGACA CCGACTACGC CGACGCCGAG TTCTGGTGGG AGATGTTCGA GGACCCGCTG
CTGGATCGCC TGGTGCGCGA GGCGCTGGAG AACAATATCG AGGCGGAAAT CGCCGCGGCG
CGGGTGGTGC AGGCGCGGGC GGTGCTGGGC CTGAGTCGTG CCGAGCAGTT TCCTCAGTTG
GACGGGTTCG CCGAGTTCGA ACGCGAGTAT CCAGCGGGGG ACGATGACCC GGAAACCGAG
ATTGCGATCG GGACGCTGCT GAGCTACGAG GTCGATCTAT GGGGGCGGCT GTCGCGCGCA
GAGGAGGGAG CGCGGGCGCA ACTGCTGAAC ACGGCGTTTA CCCGTGATGC CACCCGCCTG
GCGGTTGTGA GCGATGTGGT CAGCACCTAT TTCGACTACC GCGCCACGCG GGAGCAGATC
GAGACCACCG AGGCGACGAT CCTTTCCCAG ATCGAGGCGC TGGAACTGGA GCGCTCGCGC
CGCCAGAGTG GTGCCACTAC CGATCTCACC GTGCGCCAGG CCCAGGCCGA GCTGGAGACC
AGCCGCGCGG GCCTGCCCGA TCTGCGCGCC GATGCCGCAC AGCAGCGCCG GGCGCTGGCA
GTCCTGGTCG GGGATACCGA GGCGGTGGTC GAGGGCCTGG AGGGGCTCGG CGACGAGGGT
CTGGAAGACC TGCCGGATAC GATCTCCGGA CTCCCGCATT CAGTACCGTC GGACCTGATG
ATCCGCCGGC CGGATATCCG GGCGGCGGAG GCCAGCCTGA TTGCGGCCAA TGCCGATATC
GGCGTGGCCC GCGCGGAATG GCTGCCGAGC CTGAACCTGG CCGCGCTGTT CGGGCAGGAG
GTCAGCCGGG TCAGCCAGTT TTCCTCCAGT GATTCGTTCT TCTGGGAGTT CCTGGCGGAG
TCCACGGTGC CGATCCTCGA TTTCGGGCGG CGGCGCGCCA CGATCGAAGG CGTGGAGGCC
GAGCGCGATA TCGCCGAACT GGAATACCGC GCGGCGATTC AGGAGGCCCT GGAAGAGGTC
GCCAATACCT GGAGCGTGCT GAACGCGGCG CATGAGCGGG TGGAGGTGCG CCAGCGCGAA
GTCGGGGCCC GGGTCGAGGT GCTGGACCTG GCGGAGCGCC GCTATCTGGG CGGGTTCGTG
GGCTATCTGG AGGTGCTGGA TGCGCGGCGG GCCCTGCTGG ATGCGCGCCT GACGCTGACC
GAGGCCTCGC GTGATCGTCT GGCGGCCACC GCGACGCTGT TCCGCGCCCT GGGCGGTGGC
TGGGACAGCG CCGCGATTCC GCATGATGTG CTGGAGGACG ATGACCCGGA TGCCGCCGAG
GCGGAAGCTG AGGAGCAAAT CATCGTCCCG GCCGATTCGG AAGACTGA
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| Protein sequence | MRRTLLGVSA AALLAGCAVG PDYERPEVTL PDEWPEEIGD QMDTDYADAE FWWEMFEDPL
LDRLVREALE NNIEAEIAAA RVVQARAVLG LSRAEQFPQL DGFAEFEREY PAGDDDPETE
IAIGTLLSYE VDLWGRLSRA EEGARAQLLN TAFTRDATRL AVVSDVVSTY FDYRATREQI
ETTEATILSQ IEALELERSR RQSGATTDLT VRQAQAELET SRAGLPDLRA DAAQQRRALA
VLVGDTEAVV EGLEGLGDEG LEDLPDTISG LPHSVPSDLM IRRPDIRAAE ASLIAANADI
GVARAEWLPS LNLAALFGQE VSRVSQFSSS DSFFWEFLAE STVPILDFGR RRATIEGVEA
ERDIAELEYR AAIQEALEEV ANTWSVLNAA HERVEVRQRE VGARVEVLDL AERRYLGGFV
GYLEVLDARR ALLDARLTLT EASRDRLAAT ATLFRALGGG WDSAAIPHDV LEDDDPDAAE
AEAEEQIIVP ADSED
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