Gene TK90_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1616 
Symbol 
ID8807388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1723857 
End bp1724903 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content66% 
IMG OID 
ProductrecA protein 
Protein accessionYP_003460849 
Protein GI289208783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.445296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.968936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGAGA ATCGCAAGAA GGCCCTGACC GCCGCACTGG GGCAGATCGA ACGCCAATTC 
GGCAAGGGCG CGGTGATGCG CATGGGCGAT CAGCAGGCGG TGGACGTCCC CGCGATCTCC
ACGGGCTCCC TGGCGCTGGA CATCGCGCTC GGGATTGGCG GCGTGCCGCG CGGGCGCGTG
GTCGAGATCT ATGGCCCGGA GTCCTCGGGC AAGACGACCC TGACCCTGCA GGTGGTGGCC
GAGGCGCAGA AGCTGGGCGG CACCGCCGCG TTCGTGGACG CCGAGCACGC GTTGGACCCG
ACCTACGCCG AGAAGCTGGG CGTGAACGTG GACGATCTGC TGGTCTCGCA GCCGGATACC
GGTGAGCAGG CGCTGGAGAT CGCCGACATG CTGGTGCGCT CCGGTGCGGT GGATGTGGTG
ATCGTCGACT CGGTGGCCGC GCTCACGCCC AAGGCCGAGA TCGAGGGCGA GATGGGCGAC
TCCCATGTCG GCCTGCAGGC GCGTCTGATG TCGCAGGCGC TGCGCAAGCT GACCGCCAAC
ATCAAGCGCT CCAACACCCT GGTCATCTTC ATCAACCAGA TCCGCATGAA GATCGGCGTG
ATGTTCGGCA GCCCCGAGAC CACCACCGGC GGCAACGCGC TCAAGTTTTA CTCCTCCGTG
CGCATGGATA TCCGCCGCAT CGGCGCGATC AAGAAGGGCG ACGAGGTGAT CGGCAACGAG
ACCCGCGTGA AGGTCGTCAA GAACAAGATG GCACCCCCGT TCCGCGAGGC CTACTTCGAG
ATCCTCTACG GCGAGGGCAT CTCGCGGGTC GGCGAGATCA TCGAGATGGG TGTGAAGGAA
GGCCTGATTG ACAAGGCCGG CGCCTGGTAC AGCTACAACG GCGAGCGGAT TGGTCAGGGC
AAGGAAAACG CCCGCCAGTA CCTGAAGGAC AACCCGCAGA TCGCCGAGGA AGTCGAAAAG
ACCCTGCGCG AACGCCTGCT GCCGAAGCGC AACAAGGCTG CGGTGGAGGA CGAGCCGGTC
GATGCCCCGG TCGAGGAGCA AGGCTGA
 
Protein sequence
MDENRKKALT AALGQIERQF GKGAVMRMGD QQAVDVPAIS TGSLALDIAL GIGGVPRGRV 
VEIYGPESSG KTTLTLQVVA EAQKLGGTAA FVDAEHALDP TYAEKLGVNV DDLLVSQPDT
GEQALEIADM LVRSGAVDVV IVDSVAALTP KAEIEGEMGD SHVGLQARLM SQALRKLTAN
IKRSNTLVIF INQIRMKIGV MFGSPETTTG GNALKFYSSV RMDIRRIGAI KKGDEVIGNE
TRVKVVKNKM APPFREAYFE ILYGEGISRV GEIIEMGVKE GLIDKAGAWY SYNGERIGQG
KENARQYLKD NPQIAEEVEK TLRERLLPKR NKAAVEDEPV DAPVEEQG