Gene TK90_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1602 
Symbol 
ID8807373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1708333 
End bp1709361 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content66% 
IMG OID 
Productfatty acid/phospholipid synthesis protein PlsX 
Protein accessionYP_003460835 
Protein GI289208769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0965157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTG AATTCACCAT CGCCCTGGAT GTGATGGGCG GCGACCACGG GGCCCCCGTG 
GTGCTCCCGG CTGCCCGCCG TTCGCTGAAG GTGGCAGACG ACTTCCGCTT GCTGCTGGTG
GGGGACGAGG CGACGATCGA ATCCGGTCTT GCCGAATGGA CGGCGACCGA GCGCGATCGC
GTTGAAATCG TGCATGCCAG CCAGGTGGTC GGCATGGAGG AGTCGCCGGC CGTCGCCCTG
CGTACCAAGC GTGACTCCTC GATGCGGGTG GCCATCGACC AGGTCAAGAA AGGCACGGCC
CAGGCCTGCG TGTCGGCCGG TAACACCGGC GGGCTGATGG CCACCGCGCG TTATGTGCTG
AAGACCCTGC CGGGGATTGA CCGTCCGGCG ATCGCGACTG CGCTGCCGTC TTTGTACGGT
CATACCCACA TGCTGGATCT CGGCGCCAAC GTGGACGTCG AGGCGGCACA CCTGTACCAG
TTCGCGGTCA TGGGCTCGGT GCTGGCGAAT GCGGTGGACG GGCTCGAGGC CCCCAAGGTG
GGGCTGCTCA ATATCGGGTC GGAGGCCATC AAGGGTAACG ACCGGGTACG CGAGGCGGGC
CGCATGCTGG AGGAATCCAG CCTGAACTAT GTCGGCTTCG TCGAGGGCAA CGACGTCTAC
TGCAGCGATG TCGACGTGGT GGTCTGCGAC GGCTTTGTCG GCAACGTGGC GCTGAAGGTC
AGCGAGGGCG TGGCCAAGAT GATCTCCACG AACATGAAGG CCGAGTTCCG CGCCTCGCTG
TACTCGCGGC TGGCCGGTCT GTTCGCGCTG CCCGTGCTGC GCCGGTTGCG CCACCGCTTT
GACCACCGGC GTTACAACGG GGCCTCGCTG CTGGGGTTGC AGGGCGTGGT GATCAAGAGC
CACGGCAGTG CCGATGCCCT GGCATTCGAA TACGCGATCC GCATTGCCCG GGTCGAGGCC
GAGGCCAACA TCTCCAGCCG CATCGACAAG CAGCTGGGAC AGTTACTGGG GCAGGAGCAC
GCGCAATGA
 
Protein sequence
MSREFTIALD VMGGDHGAPV VLPAARRSLK VADDFRLLLV GDEATIESGL AEWTATERDR 
VEIVHASQVV GMEESPAVAL RTKRDSSMRV AIDQVKKGTA QACVSAGNTG GLMATARYVL
KTLPGIDRPA IATALPSLYG HTHMLDLGAN VDVEAAHLYQ FAVMGSVLAN AVDGLEAPKV
GLLNIGSEAI KGNDRVREAG RMLEESSLNY VGFVEGNDVY CSDVDVVVCD GFVGNVALKV
SEGVAKMIST NMKAEFRASL YSRLAGLFAL PVLRRLRHRF DHRRYNGASL LGLQGVVIKS
HGSADALAFE YAIRIARVEA EANISSRIDK QLGQLLGQEH AQ