| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1594 |
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| Symbol | |
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| ID | 8807363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1697685 |
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| End bp | 1700213 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003460827 |
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| Protein GI | 289208761 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTCC TGCTGGCGGT GTCCCTGTGC CTGCCCGCCG GGGCCGGCGC GGATGATCCC
CTGCGCATAG GGCTGTACGA GAACGTGCCC AAGGTCGGCA CGGGTGACGA TGGGGCGGCA
GGGGGCGTGT TCGTCGAGTT GCTGGACGCC ATCGCGCGAC GCGAGCACTG GCGGCTGGAG
TATGTCTCGT GCGAGTGGTC GGCCTGTCTG GAGGCCCTGG AGGCGGGCGA GATCGACCTG
ATGCCGGATG TCGCGCTGAC GCCGGAGCGG CGCGAGAGCC TCGCGTTTCA CTCGATCCCG
GTGGCTCAGG CATGGAGCCA GGTGCTGGCG CCGATCGATT CGGGGCTGGA TCGCATCGAA
GCGCTGGAAG GCCTCCGCCT TGCGGTGCTC GATGGATCGA TTCAATACGA CTACCTGCGC
GAGTACGCAC TGGACACCGG CCTGGACTGG ACCCTTGTGA CCCGTGGCGA CATGGAATCC
GTGCTGGCTG CTGTCGCGTC GGGCGATGCC GACGTGGCCA TCACAAACAA CTTCTATGCG
CGGCGTCATG CACGCCAGCA TATGCTGGTG GAAACCCCCG TCACCTTCGA CCAGGTCGGT
CTTTACTACG CCGCTGCTCC TGGGCGGCAG GATGACCGAC TGGAGGTTAT CGACGCCTAC
CTCCAGCGCT GGAAGGGCGA CGCGGGGTCG CCCTATCAGC ACGCGATGGA GCAGGCACTG
GAACCACCCC TCGGGGAGGG GGAAATCCCG ACGTGGGCCT GGTCGGCGCT GGCGTCCGCC
GCCGTGATCG CACTCGTCCT GGGGCTGATG GCGGTCTGGT TGCGACGCAC CGTGCGCGCG
CAGACACGTG CCCTGCGCGA GGCCAATCAG CGTCTCGAAC ACCTGCTCGA GAGTGGACCG
GTCGTGCTCT ATCAACTCAA TGCGCTGGAT TTCAAGCCGC TTTGGGTGAG TGGCAACTTC
GCGCGGCTGT TTGGATTCAA TTCCAGGGTG GCGCTGCAGC CGGGCTGGTG GGAGCAGCAA
GTCCATCCGG AGGACCGGGC CACGGCCATG CGCGAGAACC GGCGTTTGCA GGAGGAACGC
CACATGGTCC GTGAACTGCG CCTGTTCGAT GGCTGGGGCA AGCTGCGCCA TATTCGCGAC
GAGATGCGGA TCATTCCCGG CGGCAATCAG GGACAGCGCG GGGCCGAGGT GGTCGGCAGC
TGGACGGATC TCACCGCCAG CATGGAGCAG AAAGAAGCGC TGCGGCAGAT GGCCCATTAC
GACGCGCGTA CCGGCCTCCC GAACCGCGTG CTGTTGCACG ACCGGCTGGG ACACACCCTG
GAACGCGCGA TGGCCGATGG TCTTGCGCGC TGGGTGGTGC TGATCGACCT GGATCGCTTC
CGCAATGTCA ACGAGACCCT GGGAACATCG GCGGGCGACC GCGTGCTGGA AGGTTTGGCG
GAACGGCTTG GGGGGTTACT GGGGCCGCAG GATACGGTGT CTCGCGTAGG AGCAGACGAG
TTCTGCCTGA TTATCGAAAA CCCGCCGATG GATGGCGGCG CCGAGGCCTT CCTCGAGCAG
CTGCTGGAAA CCTTGCGCGA ACCCTGCGCT ATCGGTGGGC GTGCGCTGGT CACCACGGCG
AGCGTCGGGC TGGCGACGTT CCCCGAACAT GGCAACACGC GTGACGAATT GTTGACCGCC
GCGGAACTCG CAATGGCGGC CTCGCGCAGC GTTGGCGGGG ACACCTGGCA TGTCTACGAG
CCCGGAATGG GGGCGCAGAC GGAACATCGT CTGTTCCTGG AAAACGACCT GCGTAGCGCC
ATCGCCAACG ACGAGCTGCT GCTCTACTTT CAGCCGCAGC TGGAGATGCA GTCGGGCCGG
CTGGTGGGGA TGGAGGCGCT GGTGCGCTGG CGTCATCCCG TTCGCGGAAT GGTGTCCCCC
GCGGAGTTTA TCCCGCTGGC GGAAGAAACC GGGATGATCC AGGCCATTGA TCGCTGGGTG
TTGAACGCGG CCTGTGCCCA GCTGGCGCAT TGGGACCAGG ACGGCCGAGG CGTGCCGACC
GTGGCCGTGA ACCTGTCCGC GCGCGAGCTG CATGACGAAA CTCTGGTGGC GGCGATCCAG
GAGATCCTGG AGCACCACGG TCTGGAGCCC GACCGGCTGG AGCTGGAACT GACCGAGACC
ATGATGATGG AGCAGCCAGA GCGGGCGCTG GCCGTGCTGC ACCGCCTGGA AACGCTCGGC
GTGACGCTGG CCATGGATGA CTTCGGTGCG GGCTATTCCA ACCTGGCGCA TCTGCGTCGC
TTGCCGCTGC GGCGGCTGAA GATCGACCAG TCACTGGTCC GCGATATCGG GCACTCGCGC
AACAACGAAT CGATTATCCG CGCCATCATT GCCCTGGCCG ACGCACTGGG GCTGGACCTG
ATTGCCGAGG GTGTGGAAGA GGCGGGCCAG CAAGCGTTCC TGCTACGCGA GGGCTGCCGT
TTCGGGCAGG GCTACCTGCT GGGCCGCCCG GCCCCGGCCG ATAATGCCTT GCAAGGCATT
GGCGCATAG
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| Protein sequence | MPVLLAVSLC LPAGAGADDP LRIGLYENVP KVGTGDDGAA GGVFVELLDA IARREHWRLE
YVSCEWSACL EALEAGEIDL MPDVALTPER RESLAFHSIP VAQAWSQVLA PIDSGLDRIE
ALEGLRLAVL DGSIQYDYLR EYALDTGLDW TLVTRGDMES VLAAVASGDA DVAITNNFYA
RRHARQHMLV ETPVTFDQVG LYYAAAPGRQ DDRLEVIDAY LQRWKGDAGS PYQHAMEQAL
EPPLGEGEIP TWAWSALASA AVIALVLGLM AVWLRRTVRA QTRALREANQ RLEHLLESGP
VVLYQLNALD FKPLWVSGNF ARLFGFNSRV ALQPGWWEQQ VHPEDRATAM RENRRLQEER
HMVRELRLFD GWGKLRHIRD EMRIIPGGNQ GQRGAEVVGS WTDLTASMEQ KEALRQMAHY
DARTGLPNRV LLHDRLGHTL ERAMADGLAR WVVLIDLDRF RNVNETLGTS AGDRVLEGLA
ERLGGLLGPQ DTVSRVGADE FCLIIENPPM DGGAEAFLEQ LLETLREPCA IGGRALVTTA
SVGLATFPEH GNTRDELLTA AELAMAASRS VGGDTWHVYE PGMGAQTEHR LFLENDLRSA
IANDELLLYF QPQLEMQSGR LVGMEALVRW RHPVRGMVSP AEFIPLAEET GMIQAIDRWV
LNAACAQLAH WDQDGRGVPT VAVNLSAREL HDETLVAAIQ EILEHHGLEP DRLELELTET
MMMEQPERAL AVLHRLETLG VTLAMDDFGA GYSNLAHLRR LPLRRLKIDQ SLVRDIGHSR
NNESIIRAII ALADALGLDL IAEGVEEAGQ QAFLLREGCR FGQGYLLGRP APADNALQGI
GA
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