Gene TK90_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1577 
Symbol 
ID8807346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1675111 
End bp1678605 
Gene Length3495 bp 
Protein Length1164 aa 
Translation table11 
GC content70% 
IMG OID 
Productchromosome segregation protein SMC 
Protein accessionYP_003460810 
Protein GI289208744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0714092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACTCG CCCGAATCAA ACTGGCCGGC TTCAAGTCCT TCGTGGATCC GACGACACTG 
GTGCTGCCCG GAAACCGCGT GGGCATCGTG GGGCCGAACG GCTGTGGCAA GTCGAACACC
ATCGACGCCG TGCGCTGGGT GATGGGCGAG TCCTCGGCCA AGCACCTGCG CGGCGACTCC
AGCGAGGACG TGATCTTCAA CGGCTCCTCC AGCCGCAAGC CGGTCGGGCA GGCCTCGATC
GAGCTGATCT TCGACAACTC CGACGGTCGC CTGGGCGGCG AGTACAGCGC CTATGGCGAG
ATTGCCGTAC GCCGTGCGCT GACGCGCGAC GGCCAGTCCA AGTACTTCCT CAATGGCCAG
CGTGCGCGCA AGCGCGACGT CGTGGACCTC TTTCTTGGCA CCGGCCTGGG CCCGCGCAGC
TACGCCATCA TCGAGCAGGG CATGATCGCG CGCCTGATCG ACGCCCGGCC GGAGGAACTG
CGCGTTTACC TGGAGGAGGC CGCCGGCATC TCCAAGTACA AGGAGCGCCG GCGCGAGACC
GAGAACCGCG TACGTCACAC CCGCGAGAAC CTGGAGCGTC TGGACGATGT GCGCGACGAG
GTCGCCAAGC AGGCCGAGCG CCTTAACCGT CAGGCCGCCA CCGCCGAGAA ATACCAGACC
CTGGCTGCCG AGCGCCGGCA AAAGCGCGCC GAGGCCATCC TGCTGCGCCT GCGCGCCCAG
GAACAGGAAT TGGAGGCGAG CCGCCAACGC CTGCAGGACG CCGAGACGCA ACTGGCGGGC
ACCCAGGCTG AGGCGCAGAA GGTCCGCACC GAGACCGAAC AGCAGCGCCA GACGCGCGTG
GACCTGGAGG CGGCGACCAC CGAGGCGCAG TCCGCCTATT ACGACCGGGC CGCCGAGGTC
TCGCGCCTGG AGCAGTCGAT CCGCCACGCG GAGGACGAGC TGGCACGTGA GCGCGCCGAA
CTGCAGCAAC TCGAACAACG CATCCAGACC GCGGGAGACG AGTTCGCGGC GCTCGAGCAG
CGCATTGTCG AGGCCGAACG CGAGCGTGAT CAGCGCCAGC AGGAAGCGGA GACTGCCGAG
GCGGAACGCG AACGTCTGGA GGCAGCTGCG GAGCAGGCCG AGAACGAGTT CCAGGCCGCG
CGCGAGGCAC AGTCCGAGTG GGAGCGGGCG CTGGCCGAGC CGCGCCAGAA CGCCCAGCTG
GCGCGCTCGC GCATGGATCA CGCCGAACAT CAGCTGGCGC GTCTGGCCCA GCGCCGCGAG
CGCCTCGACG CCGAGCGCGC GGCTCTGCCA CAGACCCATC CGGGCGAGGA GGCCGAGCGC
CTGCAGCGCG AGCGCGATGC TCTGGCCGAA CGCCTGGAGG AGCTGCGCCA CGAACGCGAG
CAGCAGCAGG AGCAACTGAA CCAGCTCACC GAGGCCCGCC GCGAGGCCCG CGACGCGCTG
CACGAGGCCG AGCGCGAGGC GCGCGAGGTG GCCGGGCGCC TGGCGGGGCT GGAACACTTC
GCCGGCGAGG ATGACCCGGC CGAGACCCGT GAGCGCCGCG AGGCCTGGGC ACGCGAGCAG
GGGCTCGATC TCTCGCGGCC GCTGGTGCAG CAGCTGGAGG TCGACGAGGG CTGGGATACG
GCCGTGGAGC TAGCGCTCGG GGCCTGGCTC GAGGCGGCGG TCCTGGACGC GCCCGAGGCG
ACACGCGACT GGCCGGATGC CGCGCTGCGC CTGGTGAGCG CGGAGCCCGG CGCGGATGCC
GAGATCCCGC GCGACTCCCT CGCCGCGCGT GTGCGCGGTT CGGCGCCGGT GGGCCACTGG
CTGGCACGCA TCCATTGTGC GACCGAGCTG GAGGATGCCC GCCGCAGGAT GGCCACGCTG
GCGCCGGACG AGAGCGTGAT GACACCCGAT GGCACCTGGA TGGGTCCCGG GTGGGTGGCC
CATCGCACGC TGGAAGGCGG TGCCTCTGGC GCGGTCGCCC GGGTGCGCCT GGCCCGCGAG
CTGCGCGAAC GCGAGCAGGC GCTGCAAGGG CAGATCGAGC AGCACCAGGC GACGCTCGCC
GAACGTAGCG AGGCGATCGA GGCGGCGCAG GCCGAGCGCG ACCGGCTGGA TGCGCAGTTG
CGCGAACAGC AGGGCGAGAT CGACGAACGG GATCGGCGCA TTCAGCGCCT GCACGATCAG
GCACGCCAGC TGGAACAGCA GCAGGCGCGA ATCGACCACG AGGCAGGCGA GCTGGAAGAA
GAAACGGCCC GCGCGCGCGA ACAGTTCGCC ACAGCGGAGC AGGAGCGTAA CCAGGCGCTC
GCCACGCTGG AGACCCTCGA CGCCGACGGC GAGGCGCTGG AAAACCGGCT GGAGGCCGCG
CGTGGCACCC AGGGTCGCGC CCGCGAGTCC GTGCGCGAGG CGCGCGATGC GGCCGGCCGC
GCGCGGATGG CGGAACAGGA GGCGCGCCAC CGGCTGGAGC GCGAGCAAAG CGAACACACG
CGTCTGGAAC GGCAGCGCGC GGAGGACCGC GAGCGCTTCG AGAAGCTGCA ACAGGGTCTC
GCCGGGCGCG AGGGCCCGCT GGAACAGTGG CGCGGTGACC TGCAGGCGGC CGCGGAGCAG
CGTCAGCAGG CGGAGGAACG CCTCACGCGG GCGCGCTCGG ATCTCGAGGC CTGCGATGCG
CGCCTGCGCG AGCTGGCCAC CCGAGCCAGC GAGCTGGACA GTCGCGTCGA GAGCCAGCGC
TCCACCTGCG AGGAGTTGCG CCTGGACCAG CGCGAACGCT CGGTACAGAT TGATCAGCTC
AAGGCTCAGT TTCAGGAGTC GGGCTTTGCC ACTGAGACGC TCGCCGAAGG GCTCGCGGAG
GATGCCTCGG TGCCGGCCTG GGAGCAGGCC ATCGCGGAGC TCGACCGCAA GATCGAACGC
CTCGGTCCGA TCAACCTGGC CGCGATCGAC GAGGCGCGCA GCCTGGAGGA GCGCTCACGC
TATCTGGAGG AACAGCATGC GGACCTGATC GAGGCCCTGG AGACGCTGGA GGCGGCGATG
CACCGTATCG ATCGCGAGAC GCGCCAGCTA TTCAAGCAGA CCTTCGATCA GGTGAACGCC
GGGCTGGGAC AGAAATTCCA GCGCCTGTTC GGCGGCGGCG AGGCGCGCCT GGAGATGACC
GGTGACGACT TGCTGGATAC CGGCGTGACC ATCATGGCGC GTCCGCCGGG GAAGCGGCTG
TCTACCATCC ATCTTATGTC CGGGGGCGAG AAGGCGCTCA CAGCATCGGC GCTGGTGTTC
GCTATCTTTG AATTGAATCC GGCACCCTTC TGCATGCTGG ACGAGGTGGA TGCGCCGCTC
GACGAGGCCA ACGTCGGGCG CTTCTGTGAG CTGCTGGAGG ACATGTCGGA GCAGATCCAG
TTCATCTTTA TTACCCATAA CAAGGCCACG ATGGCCATGG CGGAACAGCT GATCGGCGTT
ACCATGCACG AACCGGGGGT CTCGCGCCTG GTGAGCGTGG ATATCGACGA AGCCGTGGAA
CTGGCCGAGG CCTGA
 
Protein sequence
MRLARIKLAG FKSFVDPTTL VLPGNRVGIV GPNGCGKSNT IDAVRWVMGE SSAKHLRGDS 
SEDVIFNGSS SRKPVGQASI ELIFDNSDGR LGGEYSAYGE IAVRRALTRD GQSKYFLNGQ
RARKRDVVDL FLGTGLGPRS YAIIEQGMIA RLIDARPEEL RVYLEEAAGI SKYKERRRET
ENRVRHTREN LERLDDVRDE VAKQAERLNR QAATAEKYQT LAAERRQKRA EAILLRLRAQ
EQELEASRQR LQDAETQLAG TQAEAQKVRT ETEQQRQTRV DLEAATTEAQ SAYYDRAAEV
SRLEQSIRHA EDELARERAE LQQLEQRIQT AGDEFAALEQ RIVEAERERD QRQQEAETAE
AERERLEAAA EQAENEFQAA REAQSEWERA LAEPRQNAQL ARSRMDHAEH QLARLAQRRE
RLDAERAALP QTHPGEEAER LQRERDALAE RLEELRHERE QQQEQLNQLT EARREARDAL
HEAEREAREV AGRLAGLEHF AGEDDPAETR ERREAWAREQ GLDLSRPLVQ QLEVDEGWDT
AVELALGAWL EAAVLDAPEA TRDWPDAALR LVSAEPGADA EIPRDSLAAR VRGSAPVGHW
LARIHCATEL EDARRRMATL APDESVMTPD GTWMGPGWVA HRTLEGGASG AVARVRLARE
LREREQALQG QIEQHQATLA ERSEAIEAAQ AERDRLDAQL REQQGEIDER DRRIQRLHDQ
ARQLEQQQAR IDHEAGELEE ETARAREQFA TAEQERNQAL ATLETLDADG EALENRLEAA
RGTQGRARES VREARDAAGR ARMAEQEARH RLEREQSEHT RLERQRAEDR ERFEKLQQGL
AGREGPLEQW RGDLQAAAEQ RQQAEERLTR ARSDLEACDA RLRELATRAS ELDSRVESQR
STCEELRLDQ RERSVQIDQL KAQFQESGFA TETLAEGLAE DASVPAWEQA IAELDRKIER
LGPINLAAID EARSLEERSR YLEEQHADLI EALETLEAAM HRIDRETRQL FKQTFDQVNA
GLGQKFQRLF GGGEARLEMT GDDLLDTGVT IMARPPGKRL STIHLMSGGE KALTASALVF
AIFELNPAPF CMLDEVDAPL DEANVGRFCE LLEDMSEQIQ FIFITHNKAT MAMAEQLIGV
TMHEPGVSRL VSVDIDEAVE LAEA