| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1575 |
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| Symbol | |
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| ID | 8807344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1671770 |
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| End bp | 1673863 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003460808 |
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| Protein GI | 289208742 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTCTC CCTCCGCGTC CCGGGACGGC ACGACGGGCG CGGCGGGGGA GGTAGGCGAG
CGGATCGAAC AGCTGCGCCG CCAGATCGAG CACCACAACT ACCGCTATTA CGTCCTCGAC
GACCCGGAGG TCTCCGACGC CGAGTTCGAC GCCCTGATGC GCGAACTCGA ACAGCTCGAG
GCCGATCACC CTGACCTCGT CACCCCCGAC TCGCCCACAC AACGGGTCGG CGGAGCGCCT
GCCGCCGGCT TCGACACCGT GCGCCATCGT CTGCCGATGC TGTCGCTGGC CAACGGCTTC
GAGTCCGACG AAATCCGCGA CTTCGACCGT CGTGTACGCG AGCGCCTGGC CAAACAGACT
GGCGATCCCG CGCGCGCCGA GCAGGCCGTC GCCTACATGG CCGAACCCAA GCTGGACGGC
CTGGCGATCA GCCTGATCTA CGAAAACGGC CGCCTGGTGC AGGCCGCCAC GCGCGGCGAC
GGCGAGACCG GCGAGGACGT GACCGGCAAT GTCCGCACCG TGCGGCCGAT CCCGCTGCAT
CTGGGCGATC GCTATACGGA CGATGCCCCC GGCGTGCTCG AGGTGCGCGG CGAGGTGTTC
ATGCGCCGCT CGGACTTCGA ACGCCTGAAC CAGGGCCTGG AGGCCGATGG CCAGCGCGGC
TTCATGAACC CCCGCAACGC CGCCGCCGGC AGCCTGCGCC AGCTCGATCC GAAGGTGACG
GCGCGGCGCC CGCTGAGCTT CTTTGCCTAC TCCGTGGGGC ATGTCGAGGG CGGCACGCTG
CCCGACACAC AGTCCGGCAC GCTGGATTGG CTGCACCGGC TGGGCTTTCC GGTCTGCCCC
GAGCGGGCCG TGTTGGACGG GGTCGAGGGC TGCCTTGCGT ACTACGAACG CCTGGCCGAG
CGGCGCCGCG AGCTGGACTA CGAGATCGAC GGCATCGTCT ACAAGGTCGA CTCGCTGGCT
GACCAGCAGC AGCTGGGGTT CGTCTCGCGC GCGCCGCGCT GGGCGATCGC TCACAAGTTC
CCGGCCGAGG AACAGACGAC GACCCTGCGC GCCGTCGACT TCCGCGTCGG CCGCACCGGC
GCGCTGACCC CGGTCGCGCG GCTGGAGCCG GTGCTGGTTG GTGGCGTGAC GGTCAGCAAC
GCCACGCTGC ACAACATGGA CGAGATTGCG CGCAAGGACA TCCGCATCGG CGACCGCGTG
ATCGTGCGCC GTGCGGGCGA CGTCATCCCC GAGGTGGTTG GTCGCGCCGG GGGCGAGCGC
CCGGCGGACA CCCGTGCCAT CGAGATGCCC ACCCGTTGCC CGGAGTGCGA CTCGCATATC
GAACGCCCGG AGGGCGAGGC CGTGGCTCGC TGTACCGGCG GGCTGGTCTG CCCCGCGCAG
CGCCGCGAGG CCCTCAAGCA CTTCGTTTCG CGCCGCGCCA TGGACATCGA GGGTTTCGGC
GAAAAACTGA TCGAGCAACT CGCCGATGGC GGCATCGTGC AAAGCCCGGC GGATCTGTTC
GCACTGGATA CCGAGCGCCT GGAGGCGCTG GAGCGGGTCG GTCCCAAGCT CGCCGAGAAT
CTCGTCAACG CCCTGGAACA GGCGCGCGAG ACCACTCTGG CGCGTTTCAT CTTCGCCCTC
GGCATCCGCG AGGTCGGGGA GGTCACCGCA CGCAACCTGG CCACGTACTA TGGCGACCTG
GACACGCTGA TGCAGGCTGA TGCCGAGGCG TTGCAGGAGG TGCCGGACGT TGGGCCCATC
GTTGCCGAGC ACATCGCCAA CTTCTTCGCC GAACCGCACA ACCTCGAGGT GATCCGCGCC
CTGCGCGAGG CCGGCGTGCA CTGGCCCGAC CCGCCCGCGC GTCCGGCAGC GGAGAAGGGC
GAAACCGCCC CGCTGGCCGG CAATACCTAC GTCCTCACCG GCAGCTTCGA CACCATGACC
CGCGAGGAGG CCAAGGCCGC CCTCGAGGCC CGCGGCGCCA AGGTCACCGG CTCCGTCTCC
AAAAAGACCA CCGCCGTCAT CGCCGGCACC GACCCCGGCT CCAAGGTCAC CAAGGCCGAA
TCCCTCGACA TCCCCATCCT CGGCCCCGAC GACCTCGCCC AGCTCCTCGC CTGA
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| Protein sequence | MSSPSASRDG TTGAAGEVGE RIEQLRRQIE HHNYRYYVLD DPEVSDAEFD ALMRELEQLE
ADHPDLVTPD SPTQRVGGAP AAGFDTVRHR LPMLSLANGF ESDEIRDFDR RVRERLAKQT
GDPARAEQAV AYMAEPKLDG LAISLIYENG RLVQAATRGD GETGEDVTGN VRTVRPIPLH
LGDRYTDDAP GVLEVRGEVF MRRSDFERLN QGLEADGQRG FMNPRNAAAG SLRQLDPKVT
ARRPLSFFAY SVGHVEGGTL PDTQSGTLDW LHRLGFPVCP ERAVLDGVEG CLAYYERLAE
RRRELDYEID GIVYKVDSLA DQQQLGFVSR APRWAIAHKF PAEEQTTTLR AVDFRVGRTG
ALTPVARLEP VLVGGVTVSN ATLHNMDEIA RKDIRIGDRV IVRRAGDVIP EVVGRAGGER
PADTRAIEMP TRCPECDSHI ERPEGEAVAR CTGGLVCPAQ RREALKHFVS RRAMDIEGFG
EKLIEQLADG GIVQSPADLF ALDTERLEAL ERVGPKLAEN LVNALEQARE TTLARFIFAL
GIREVGEVTA RNLATYYGDL DTLMQADAEA LQEVPDVGPI VAEHIANFFA EPHNLEVIRA
LREAGVHWPD PPARPAAEKG ETAPLAGNTY VLTGSFDTMT REEAKAALEA RGAKVTGSVS
KKTTAVIAGT DPGSKVTKAE SLDIPILGPD DLAQLLA
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