| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1546 |
|---|
| Symbol | |
|---|
| ID | 8807315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1645829 |
|---|
| End bp | 1646953 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003460783 |
|---|
| Protein GI | 289208717 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0563499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0999836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTGTTA CCGACAATAA TGTCGAGACC GTGGGTGGGG AGCAGGAGTC AATAAAGATA
ATCGCGCAAA ATCTGTCGGA TGAGTTTCAG GTGGCGGTCC TTCAGCCCGG GGCGGCGAAG
AGTGATCTTG GATTTTGTTG CATTGGTATC GGGAGGCGTA CGCGCATCAA GGCGCTGGTG
ATGCGCCCAG TAGAGCTTTT ATATTATATC GTGAAGGTTA TCAGGTTCCT ACGCAGGACT
GAAGCAAAAG TGGTGCACAC GCAAGCGCAG GCGAGCCTCT TTCTGATTAG TATTGCGATC
AAGTTGCGGT TCATACCAAA GCGGTTCACG TTTGTGCACA CCGATCGGGG CACATATTCG
AAATATTCGG CGCTGGTACG GGCGCTGTTT CGGGTGTCTC TGTCGGTGGT GGATACGCTA
GTGGCCACCA CGCATCGGAA TCGGTATCTC TGGGAGGATG CGCTCTCGAG GGTGGGGTCG
AGGCCGGAAT ATGCGGTGAT TGAGAATGCG GTGTCGAGCG ACGGGGCTTG GATGGCGCGG
CCGATGGGGC AGGCCGGCAA GATAACGGTT GGCTTTGCAG GTCGTTACTG CGGATGGAAG
GATTGGCCGC TGGCGCTCGA GATAGCCCGC CGTTTGGTGG CGGATGGGGC TGTGGCGGCG
GAGTTCCGAA TGGCGGTCGG TTGCGTGGAC GAGAGAGATC GAGGGGCGGC CGAAAGCTTT
CTAAGCGATG CACATGCTGT GCTGGGGGAG GACTTAAATG CGCAGGTCAA CGTGCCACAT
GGAGAGATGG CGGAGTTTTT TCGGTCGACG GATATTTTGG TGATGACTTC GAAGCCCGGG
ACAGAGTCGT TCGGGAGAAC GGCGATTGAG GCCATGAGCG AGGGGTGTGT CGTGCTGAGT
ACGGATAGCG GGGGGCCGTC TGAGGTCCTG AATGACGCCG GGTGCATCTT GGGGGAGCCC
GACGAGTTTG TGGGAAAAAT AAAGTTCTAT GCGATGGATG TGGATGCGCG AGCCGCGAAG
GGGCGCGCGA ATCAGAAAAG GGTCCAGGAG CTGTATTCGG CGGATAGTAA CGTAGCAAAG
CATCGTGTGT TGTATCAGGC TGCCATTGCG AGGCGTGGAG CCTAG
|
|---|
| Protein sequence | MIVTDNNVET VGGEQESIKI IAQNLSDEFQ VAVLQPGAAK SDLGFCCIGI GRRTRIKALV
MRPVELLYYI VKVIRFLRRT EAKVVHTQAQ ASLFLISIAI KLRFIPKRFT FVHTDRGTYS
KYSALVRALF RVSLSVVDTL VATTHRNRYL WEDALSRVGS RPEYAVIENA VSSDGAWMAR
PMGQAGKITV GFAGRYCGWK DWPLALEIAR RLVADGAVAA EFRMAVGCVD ERDRGAAESF
LSDAHAVLGE DLNAQVNVPH GEMAEFFRST DILVMTSKPG TESFGRTAIE AMSEGCVVLS
TDSGGPSEVL NDAGCILGEP DEFVGKIKFY AMDVDARAAK GRANQKRVQE LYSADSNVAK
HRVLYQAAIA RRGA
|
|---|
| |