Gene TK90_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1536 
Symbol 
ID8807305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1635741 
End bp1636622 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID 
ProductIntegrase catalytic region 
Protein accessionYP_003460774 
Protein GI289208708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0496158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00036326 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTCGCT GCATCACGAC GCTGGCGAAG AAGGCTCCGG TGAAGCGGGT GTGTGATCTG 
CTGGAGGTGA ACCGGTCGGG CTACTACGCG GCGCAGACGC GCCGCCGGCG GCCGCGCCAG
CCGTGTGCAC TGGAGGCACG GGTCAAGGAG GCGTTCGAGC AGTCGGAATG GACCTACGGC
AGCCGCCGTG TGCAGGCCGC CCTGCGTTCG GACGGTGTGA CGGTGGGCCG CTACCGGGTC
CGCCGTCTGA TGCGGGAACA GGGCCTGCGC CCGGTCTGGA AGCGGGCGTT CGTCGTGACC
ACCCAGCGGG ATGCGACCGC GCCGGTGGTG GAAAACCACC TGGACCGGCA GTTCCAGCCA
TCGCGCCCGA ACGCGGCCTG GGTGACGGAT ATCACCTACA TCCGGACCCG CACCGGCTGG
ACGTATCTGG CGGCGGTGCT GGACCTGTTC AACCGCAAGG TGGTGGGCTG GTCCATGAGC
CGAAGGCTGG ATGCCGAGTT GGCCTGCAGT GCGCTACGCA TGGCGCTGCA GAGCCGGCAA
CCCGAGCCGG GGCTGCTGGT GCACTCCGAC CAGGGCTGTC AGTACACCAG CGACGCCTGG
CGGCGTCTGC TGGTGCAGCA CGGCGCCCGG GCCAGCATGA GCCGGCGGGG TAACTGCTGG
GACAATGCGG TGGCCGAGCG CTTCTTCCTG AACCTGAAGA CGGAGCGCGT CTGGCGACGG
GACTATGCCA ATCACGGCGA GGCCACCCGG GACATCACCG ACTACATCGT CGGCTTCTAC
AACGAGCGCC GAAGGCACTC AACCCTGGGC TACCTGTCGC CCAACGCCTA CGAGCGAAAA
TGGACAGCCG AACCTCCTAT CGAGGTGTCC GAAATCGCTT GA
 
Protein sequence
MVRCITTLAK KAPVKRVCDL LEVNRSGYYA AQTRRRRPRQ PCALEARVKE AFEQSEWTYG 
SRRVQAALRS DGVTVGRYRV RRLMREQGLR PVWKRAFVVT TQRDATAPVV ENHLDRQFQP
SRPNAAWVTD ITYIRTRTGW TYLAAVLDLF NRKVVGWSMS RRLDAELACS ALRMALQSRQ
PEPGLLVHSD QGCQYTSDAW RRLLVQHGAR ASMSRRGNCW DNAVAERFFL NLKTERVWRR
DYANHGEATR DITDYIVGFY NERRRHSTLG YLSPNAYERK WTAEPPIEVS EIA