| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1526 |
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| Symbol | |
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| ID | 8807293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1623697 |
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| End bp | 1625013 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003460766 |
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| Protein GI | 289208700 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.410853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000254488 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCGGCC GCGACCAATC CGGTGCACAT CCGGCGCTTG GGCCGCAGGA TATCCAGCGC
CGCATCGAGT CCATCTGGCG TCTGGATGCG AGCCGCATCG TGGCGGCCCT GGCGCGCTGG
AGCGGCGACT ACGCCCTCGC CGAGGACGTG GCACAGGATG CCCTGATCGC CGCCCTCGGA
CACTGGCCCA CCCAGGGAGT CCCGGAGAAC CCGACCGCGT GGCTGCTGCA TACGGCACGC
AACCGCGCGG TCGACCAGCT GCGCCGCGAA CATCGGGGTG ATGCCCTCGT CGCCGATTAC
GGCCACGAAA TCGCATGCAG CCACCTGGGG GCATCGACGC CGCAATGCAG CGACGATGTC
CGTCACGACA CGCTCGCCCT GCTGTTCATC GCCTGCCACC CGGTCCTCTC CCCCGACACC
CGCTGCGCAC TCGCCCTGCG CACCCTCGCC GGGCTCGACA ACACCGCCCT CGCCCGTGCC
TTTCTGGTCT CCGAGATCAC CATCGCGCAG CGCATCGTCC GCGGCAAACG TAAACTCGCA
CAGGCCAACG TCCGGTTCGA AACGCCATCG CCGTCAGAAT GCCGGGAACG CCTGGGATCC
GTGCACGAAG TGATCTACCG GCTGTTCACC GAAGGGCATG TAGCCAGCCA GGGCGACGCC
TGGACGCACG GGGAGTTCTG TCATGAGGCG CTGCGCATGG CCCGCGTGCT CGCACAGGCC
ATCCCCGAGG ACATCGAGAC CCAGGCACTG CTCGGCCTGA TCGAACTGCA CGGTGCGCGC
CTGGCCGCGC GCATGGATGC GCAAGGCAAC CCAGTGCTGC TGAAGGACCA GGATCGCGGC
GCGTGGGATC GCGGCGGCAT CCGCCGTGGT CTGATCGCCC TGTCCCGTGC CAACAGGCTC
GCCCGAGATC AGAAGGCCCG GCCGAGCCCA TTTCGCCTGC AGGCTGCCAT CGCCGCCTGC
CATGCGACAG CGCCCAGCTT TGCCGCCACC GACTGGCCAC AGATCGCCGC TCACTACGCA
ACGCTGTTCA CGACCACGGG ATCGCCGGCC GCACGCATCC ATCAGGCCCA GGCCGCCGCC
CAGTTCGACG ACCCGGCGCA GGTACTGGCG GCGCTCGACA CCGACATTGA TGCCCGGGCA
TTGTCCAGCT ATGTGCCTTT GCACGCCGTA CGCGGGGATC TCCTGGAACG CTGCGGCGAG
CGCGAGGCCG CGGCAGCGGC GTTCCGGCGG GCTGCCGAGC GCTCTGCCAA TGAAGCGGAG
AAGCACCTGC TGCTTGACCG TGCGCGGGCA GCCGCACCCC CAACAAAAAA GGGTTAG
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| Protein sequence | MSGRDQSGAH PALGPQDIQR RIESIWRLDA SRIVAALARW SGDYALAEDV AQDALIAALG
HWPTQGVPEN PTAWLLHTAR NRAVDQLRRE HRGDALVADY GHEIACSHLG ASTPQCSDDV
RHDTLALLFI ACHPVLSPDT RCALALRTLA GLDNTALARA FLVSEITIAQ RIVRGKRKLA
QANVRFETPS PSECRERLGS VHEVIYRLFT EGHVASQGDA WTHGEFCHEA LRMARVLAQA
IPEDIETQAL LGLIELHGAR LAARMDAQGN PVLLKDQDRG AWDRGGIRRG LIALSRANRL
ARDQKARPSP FRLQAAIAAC HATAPSFAAT DWPQIAAHYA TLFTTTGSPA ARIHQAQAAA
QFDDPAQVLA ALDTDIDARA LSSYVPLHAV RGDLLERCGE REAAAAAFRR AAERSANEAE
KHLLLDRARA AAPPTKKG
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