| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1518 |
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| Symbol | |
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| ID | 8807284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1617191 |
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| End bp | 1618747 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Glutamate synthase (NADPH) |
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| Protein accession | YP_003460758 |
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| Protein GI | 289208692 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.532472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00131604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGGAG CGAAGATCGC GGCAGTGGAG CCCAAGGGTG TCGAGCTCAA GAAGGGGGAG
GAGTACTACT TCTGCCGCTG CGGGCGGTCC AAGGACCAGC CGTTTTGCGA CGGCTCGCAC
GAGGGGACGG GGCTGGAGCC CATCGCCTTT ACTCCCGAGG AAGACGGCGA GGCGTTTCTC
TGCCAGTGCA AGCAGTCGGG TGATCTGCCG TACTGCGACG GCACGCACCA GCAGTTCGAC
GAGGACGACA TCGGGACCGA GCCGGAGTCA AAGGGCGAGT CGGGCCAGGA TGAAGGTAAC
GAGGCGCCGG ACCCGCGTAA TACCGAGACG GAGCCGCATG TCGAGCTGAT CCATCGCATG
GCCCGTTCCG GGCTGGACGA GGTGGGCCAC TACGGGCCGA CGGTGGCCAT GGGTGTGCCG
CGCAGCCGGC TCCCGATTTG GGACGACCTG CAGCTGCTGG CGGCGCAACT GGCGAGCCGG
CCATTGCCGG ACGGGGCCCC GGTCGAGACG GGGCTGGTGA TCGGGCCGGA AGCGAAGCGG
CCGCTGCGGC TGGATATCCC GATGCTGGTA TCGGACATGA GCTTTGGCGC GCTGTCGCGC
GAGGCGAAGA TCGCGCTGGC GCGCGGTGCG GAGGCGGCCG GCACAGGGAT CTGTTCCGGG
GAGGGCGGGA TGCTGGATGC CGAGCAGGCG GAGAACTCGC GCTATCTGTT CGAGCTGGGG
CCGGCGCGCT TTGGCTATTC CGACGAGGTG CTGGAGAAGG TGCAGGCCTT TCATTTCAAG
GCCGGCCAGG CAGCCAAGAC CGGTGTGGGC GGCGTGCTGC CCGGGGCGAA GGTGAGTGAC
GAGATCGCGC GGGTGCGCGG GATCGACGCG GGGCAGGATG CCATCTCGCC AGCCAGCCTG
GACGGGTTCG AGACGCCCGC GGACTACCGC CGTTTTGCCG ACGAGGTGAG GGAGAAGACC
GGGGGCATTC CCATCGGCTT CAAGCTCTCG GCCAACCATA TCGAGGCGGA TCTGGCCTTT
GCCCTGGAGG CGGGGGCGGA CTACGTGATC CTGGATGGTC GTGGCGGCGG GACCGGGGCC
TCGCCCGCGT TGTTGCGGGA TCATATCAGC GTGCCCACGA TCCCCGCGCT GGGTCGCGCC
CGGCGTTTTC TGGATGCCAA CGGTGCCAGT GGCCGGGTCA CGCTGCTGGT GACCGGCGGC
CTGCGCACGC CGACGGATTT TGTGAAGGCC CTGGCGCTGG GTGCGGACGG TATTGCGCTG
GCGAACGCGG CGATCCAGGC AGTGGGTTGT GTGGGCGCGC GGATCTGCCA CACGAATCGC
TGCCCGTCCG GTGTGGCGAC GCAGGACCCG AAGTTGCGTG CGCGGCTGGA TCCCCAGGAG
GGCGGGGAAC GGCTCGGCCG CTTCCTGCAG GCCTCGAGCG AGCTGATGTG TGTACTGGCG
CGGGCCTGCG GGCACAGCCG TCTGGAGGAC TTCGGCCCGA ACGACCTGAC GACGTTCGAC
CGCGAGTTGG CGGAACTGGC GGGCATTCAG TACGCCGGGG TGTATCCGAA GTCCTGA
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| Protein sequence | MAGAKIAAVE PKGVELKKGE EYYFCRCGRS KDQPFCDGSH EGTGLEPIAF TPEEDGEAFL
CQCKQSGDLP YCDGTHQQFD EDDIGTEPES KGESGQDEGN EAPDPRNTET EPHVELIHRM
ARSGLDEVGH YGPTVAMGVP RSRLPIWDDL QLLAAQLASR PLPDGAPVET GLVIGPEAKR
PLRLDIPMLV SDMSFGALSR EAKIALARGA EAAGTGICSG EGGMLDAEQA ENSRYLFELG
PARFGYSDEV LEKVQAFHFK AGQAAKTGVG GVLPGAKVSD EIARVRGIDA GQDAISPASL
DGFETPADYR RFADEVREKT GGIPIGFKLS ANHIEADLAF ALEAGADYVI LDGRGGGTGA
SPALLRDHIS VPTIPALGRA RRFLDANGAS GRVTLLVTGG LRTPTDFVKA LALGADGIAL
ANAAIQAVGC VGARICHTNR CPSGVATQDP KLRARLDPQE GGERLGRFLQ ASSELMCVLA
RACGHSRLED FGPNDLTTFD RELAELAGIQ YAGVYPKS
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