| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1513 |
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| Symbol | |
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| ID | 8807279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1611153 |
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| End bp | 1612487 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | squalene-associated FAD-dependent desaturase |
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| Protein accession | YP_003460753 |
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| Protein GI | 289208687 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.156187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00817062 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGCCG TTCCCGAATC GCATCCGGTC GTCGTGCTCG GCGCCGGCTG GGCCGGTCTG
ACCGCCGCGC TGACCCTGGC CCGGGCCGGC ATCGCGGTCC ACCTGATCGA GGCCGCCGCG
ACCGCAGGCG GGCGCGCCCG CAGCCTCAAC CGCGATGGTG CGGACCTGGA TAACGGCCAG
CACGTGCTGG TCGGTGCCTG TCACGCCACG CTGGACCAGC TGCGCTCAGT CGGCACCGAC
CCGGAGCGCG CCTTCGTGGC CCTGCCGTTC GGACTGCGCA TGCATGCCCC GGGCCACCCT
CACCCAGCCT TTACCCTGGA GCCCCGCTCG CCACGTCTGC CGGCCCTGGT TCATGGCTTG
TGGCAATCGC TCGCGGGCAC CCCGTTTCAC CGCAGACTCC CGGCCCTGCT GGGGGCTGCC
TCGATCCTGT ACCGGCCGTT GGAGGAAGAT CTCGACGTAC TCGAATGGCT ACAGGCGCGT
CATCAGCCGG ACACGCTGAT CCGCCAGCTC TGGGAACCGC TGTGCCTCGC GGTCATGAAC
ACGCCAATCC GCAGCGCCTC GGCGCAGATC TTCCAGAACG TGCTGCGCCT GGCCCTGAAC
CACGGGCCGG ACGACGCGCG GCTGCTCATC CCGACTCGGC CGCTGGGGTC GCTGTATCCC
GAACCGGCCC TGCGCGAACT GCACGAGCGC GGCGCCACGG TCGAAACCGG ACGGCGCATT
GTGGTCATCG AATCCAGGGG AACCGAGTCC CGCTATCAGC TCCGTGATCG TAACCATCAC
GTTACCCCTG CCAACGCGGT GATCCTCGCC ACGTCGCCCA GCGCGGCCAC TCGGCTCCTG
CCCGAGGCCC CCGAGCTCCA GCCCCACCAT CGGGCCCTGA GGGCCATGGG CGAGCGCAGC
ATCTGTACGG TCTACCTGCA CTATCCGGAC CCCGTCCTGG CACGCCCGCC GCTGCAGGGA
CTCCTCGACC AGCACGGACA ATGGCTGATT CCCCGCCAGG TGGCCGGCGA GCCGAACTGG
CTGGCCGTCG TGATCTCCAC CGCGGACGAC CTGCCGACGA TGACGGCGGA GGAGCGCTGG
CGTCGGGTTG CTAAAGAGCT GGAACGGACC TTCCCCGAAC TGGGAATGCC CCGGACCGGT
CATGTCGTGT GCGAGAAACG CGCCACCATT GATGCCCGCG TCGATCTGGA CGCGCTCCGC
CCGGTAGCCG GCACCCCCTG GCCCGGGCTG TTCCTGGCGG GCGACTATGT GACACCGGGC
CTGCCCTCGA CCCTCGAAGC GGCCGTGCAG TCTGGATTAG AATCAGCCCA CAAGCTACTG
GAGACCCTCC CTTGA
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| Protein sequence | MAAVPESHPV VVLGAGWAGL TAALTLARAG IAVHLIEAAA TAGGRARSLN RDGADLDNGQ
HVLVGACHAT LDQLRSVGTD PERAFVALPF GLRMHAPGHP HPAFTLEPRS PRLPALVHGL
WQSLAGTPFH RRLPALLGAA SILYRPLEED LDVLEWLQAR HQPDTLIRQL WEPLCLAVMN
TPIRSASAQI FQNVLRLALN HGPDDARLLI PTRPLGSLYP EPALRELHER GATVETGRRI
VVIESRGTES RYQLRDRNHH VTPANAVILA TSPSAATRLL PEAPELQPHH RALRAMGERS
ICTVYLHYPD PVLARPPLQG LLDQHGQWLI PRQVAGEPNW LAVVISTADD LPTMTAEERW
RRVAKELERT FPELGMPRTG HVVCEKRATI DARVDLDALR PVAGTPWPGL FLAGDYVTPG
LPSTLEAAVQ SGLESAHKLL ETLP
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