Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1508 |
Symbol | |
ID | 8807274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1605834 |
End bp | 1606520 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | phosphoglycolate phosphatase |
Protein accession | YP_003460748 |
Protein GI | 289208682 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.313556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0200123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCG AACTCCGCGG GGTCCTGTTC GACCTGGACG GGACCCTGCT CGACACGGCC CCGGACATGC ACGCGGCGCT CACCGTGCTG CTGGCCGAAA ACGATCGCCC ACCGCTGCCC TTCGAGGCCG TGCGCAATCA CGTCTCGCAC GGCTCCCAGG CCCTTGTGCA GCTCGGCTTT CCGGATGTCG AGGGTGCGCG CCGCGAGACC CTCAAGCAAC GCTACCTGGA GATCTACGCC CGCGACCTGT GCATCGACAC CGCTCTGTTC CCCGGGCTGG GCCCCGTGCT GGACGCCTGC GAACAGCGCG GCTGGCCCCT CGGGGTCGTG ACCAACAAGC CCGCCTGGCT GACCGAGCCA TTGCTGGAGA CCCTGGGCCT GTCCCCTCGA CTCGCCGCCA TCGTCAGTGG TGACACGCTC CCGCAGCGCA AACCGGATCC CGAGCCGATG TGGCTGGCCG CGCGGCAAAC GGGTCTGCCC CCTGAACAGC TTTGTTACTG GGGCGATGCC GAGCGCGACA TCGCCGCTGG CCGGGCGGCG GGTATGGCAA CACTCGTCGC CCGATGGGGC TACATCGATG CCAGCCAGAA CCCCGACACC TGGGGCGCCG ACGGCACGCT CGATCGCCCC GATGATTTCT GGCGCTGGCA CCAGGCCAAA GCGGACCCGC AATGGCTGGC GAGCTGA
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Protein sequence | MSRELRGVLF DLDGTLLDTA PDMHAALTVL LAENDRPPLP FEAVRNHVSH GSQALVQLGF PDVEGARRET LKQRYLEIYA RDLCIDTALF PGLGPVLDAC EQRGWPLGVV TNKPAWLTEP LLETLGLSPR LAAIVSGDTL PQRKPDPEPM WLAARQTGLP PEQLCYWGDA ERDIAAGRAA GMATLVARWG YIDASQNPDT WGADGTLDRP DDFWRWHQAK ADPQWLAS
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