| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1464 |
|---|
| Symbol | |
|---|
| ID | 8807230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1556556 |
|---|
| End bp | 1557404 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Pirin domain protein |
|---|
| Protein accession | YP_003460704 |
|---|
| Protein GI | 289208638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA CACCGCCGGA CAGCGTACGC ACAGCCCACC CGACCCAGGA CGGCGCGGGT
GTGAAGATTC GCCGCATCCA TGACTTTGGC GGCGGCCTGG ACCCCTTCCT GATGCTCGAC
GAGCTGAAGG CCAGTGCGAA GGAGGACTAC GTCGGCGGAT TCCCGTCCCA CCCGCATCGC
GGCTTCGAGA CGCTGACCTA CCTCGTCCAT GGCGGCCTGA CCCACGAGGA TTCAATGGGC
AATCAGGGTC GCGTGGAGGC CGGCGAGGCC CAGTGGATGA GTGCGGGGCG CGGGGTCATC
CACTCCGAGA TGCCCCTGCT GGACTCAGAC GGGCTGCACG GCTTCCAGCT CTGGGTGAAC
CTGCCGGCAC GGCGCAAGAT GGACCCGCCG CGCTACCGCG ACGTGCGCGC CGACGCGATG
CGCCACCTGC CGGAAGACGA CGGCCCGCTG CACTTCAAGG CGATTGCCGG GTCCTGGCAG
ACCAGCGCCG GGGATACCGA AGGCCCACTG GAGCAGATCG GCGAAGGCGC GGCGATGGCG
GATCTGAGCC TTCCGGCCGG CTACCGCCTG TCGCTGGCCG TCCAGCTGGA TGACCGGGTG
CTCGCCTATG TCTATGACGG CGAGCTCACC GGGCTGAAGA CGGGCCAGCT AGGCACCTGG
AGCGGACAGA CGCAGATCCA CCTGATCGCC CAGCAGGATG CGCGGGTGCT GCTGTTCAAG
GGCCGCCCGC TGGCCGAACC GATCGCCCAC TACGGCCCGT TCGTGATGAA CACTCCCGAC
GAGATCGAGC AGGCGATCAG CGACTACCAG TCCGGCCAGC TCGCGGCCGA GCCGGCCAGT
ATCGACTGA
|
|---|
| Protein sequence | MTPTPPDSVR TAHPTQDGAG VKIRRIHDFG GGLDPFLMLD ELKASAKEDY VGGFPSHPHR
GFETLTYLVH GGLTHEDSMG NQGRVEAGEA QWMSAGRGVI HSEMPLLDSD GLHGFQLWVN
LPARRKMDPP RYRDVRADAM RHLPEDDGPL HFKAIAGSWQ TSAGDTEGPL EQIGEGAAMA
DLSLPAGYRL SLAVQLDDRV LAYVYDGELT GLKTGQLGTW SGQTQIHLIA QQDARVLLFK
GRPLAEPIAH YGPFVMNTPD EIEQAISDYQ SGQLAAEPAS ID
|
|---|
| |