Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1460 |
Symbol | |
ID | 8807226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1553362 |
End bp | 1554264 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | periplasmic binding protein |
Protein accession | YP_003460700 |
Protein GI | 289208634 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.77673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTTAA TCGCCATAAA ACGCCAGTTG ACGCTCCTTG TCACGATACT CCTGTGCGCG GCACCGGCAC TGGCCGAGCC GGTCACGGTG ACCGACGACG ACGATCGCGA GGTCACGCTC GACCGGCCCG CCGAACGCAT CGTCAGCCTG GCCCCGCACA TCACCGAAGT CCTCTTCGCC GTCGGTGCCG GAGACAAGCT GGTGGGCGTC ACCCAGCACA GCGATTTTCC ACCGGAGGCG GAGATGATCC CGCGAGTCGG CGGCTACAGC CGCATCGATC TGGAACGCGT GGTCGAAATG GACCCGGACC TGGTGGTCGC CTGGCGCAGT GGCAATTCCA GCTCGCAGAT CGAGCGCCTG CGCGATCTGG GACTGAATGT CTATGTCTCG GAACCGCGCA GTTTCGAAGG GGTGGCCTCC AGCATGCGTC GCATGGCCCA GCTCGCGGGT ACCGAGGAAC ACGGCGAAGA GGCGGTGCAG GCCTTTCTCG ACGAGATCGA GACGCTACGG CTCGACTATG CCGACCGCGA CCCGGTCCCG CTGTTCTACC AGGTCTGGGA GCAGCCCCTG ATGACGGTCA ACGACGAACA CCTGATCAGC GAGGCCATCC GCCTGTGCGG GGGCGACAAC GTGTTCGGCC ACCTGGACCG CCTGGTACCG CGCATGGATC GCGAGGCCGT GATCGACGCC GACCCGGAGG TGATCATTGG CGGCGGCATG GGCGAGGACC GGCCGGACTG GGTGATTGCC TGGGAACAAT GGGAGGACAT GACCGCGGTG CAGCGCGACA ACCTGTTCTT CATCCCGCCG TCGCTCCTCC AGCGTCACAC TCCGCGGATT GCCGAAGGAA CCCGGCTCAT GTGCGAGGAA CTCGAACGCG CCCGCCAGCG CCGGACGGAC TGA
|
Protein sequence | MILIAIKRQL TLLVTILLCA APALAEPVTV TDDDDREVTL DRPAERIVSL APHITEVLFA VGAGDKLVGV TQHSDFPPEA EMIPRVGGYS RIDLERVVEM DPDLVVAWRS GNSSSQIERL RDLGLNVYVS EPRSFEGVAS SMRRMAQLAG TEEHGEEAVQ AFLDEIETLR LDYADRDPVP LFYQVWEQPL MTVNDEHLIS EAIRLCGGDN VFGHLDRLVP RMDREAVIDA DPEVIIGGGM GEDRPDWVIA WEQWEDMTAV QRDNLFFIPP SLLQRHTPRI AEGTRLMCEE LERARQRRTD
|
| |