| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1451 |
|---|
| Symbol | |
|---|
| ID | 8807217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1545004 |
|---|
| End bp | 1545633 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003460691 |
|---|
| Protein GI | 289208625 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.776245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCAT TCCCCTCCCG TCTGAACCCG GGCCGGCTGG TCCTGCGCAC ACTGACGAAC
CCCCTGCGGG CGGTACGCGA GGCCGGCGAA CTGGAGACAG TGCCGCCCTG GTGGCAGACG
TTCGTGCGAC TGGCGTTCCC GGTGCTGCTG GTCAGCGTGA TCGTCAGCCA GTGGCTGTAC
CAGATCATCC CGCCCGGGTT GCCGCCGGAG GCGATGCCGG GGGCCTGGGG CTTCGGGGTC
TACAGCGTGC TGGCGATGAG TATCGGGGTG CTGGGCCTGG CCTGGTCCGC GCACTACCTG
ACCGAGCTGT TCCAGGGCTA CTCCCATCCG GATCGGGCCA TGCTGGCCGT GACCATCGGC
CTTCTGCCGG CCTGGGTGGG CAAGGTTGTG GCCGCCTTCC CCTGGCCCTG GGGCAACACC
GTCGGCTTGC TGCTGATCCT CTACAGCCTG TGGCTGCTGT ACGGGTCGCT GTGCGGCATC
CTCGGGCTGA AGCGTGGCAA CCGCATCGGC CTGTTCGTGG CCACCGTCTT CTGCGGCGCG
TTCATCACCC TCATCTTCGG CTGGCTGCTG ATGGACCTGA TCCCCGGCGC CACCCCCGAG
ACCCGCATCG GCACCACCTG GCTGATCTGA
|
|---|
| Protein sequence | MNSFPSRLNP GRLVLRTLTN PLRAVREAGE LETVPPWWQT FVRLAFPVLL VSVIVSQWLY
QIIPPGLPPE AMPGAWGFGV YSVLAMSIGV LGLAWSAHYL TELFQGYSHP DRAMLAVTIG
LLPAWVGKVV AAFPWPWGNT VGLLLILYSL WLLYGSLCGI LGLKRGNRIG LFVATVFCGA
FITLIFGWLL MDLIPGATPE TRIGTTWLI
|
|---|
| |