| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1448 |
|---|
| Symbol | |
|---|
| ID | 8807214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1541111 |
|---|
| End bp | 1542424 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | flagellin domain protein |
|---|
| Protein accession | YP_003460688 |
|---|
| Protein GI | 289208622 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.424798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAAG TTATCAACAC GAACATCCTG TCCCTGAACG CTCAGCGCAA TCTGAGCCAG
TCGCAGGGTG CCCTGGGCCA GAGCCTCGAG CGGCTGTCCT CGGGCCTGCG AATCAACAGC
GCAAAGGACG ATGCCGCCGG TCTGGCCATC TCCGAGCGCT TCAGCACGCA GATCAACGGC
CTGAACCAGG CTGTGCGCAA CGCCAACGAC GGTATCTCGT TCTCGCAGAC CGCCGAAGGT
GCGCTGAGTA CCGTGGGCGA TGCGCTGCAG CGGATCCGTG AACTGTCCGT ACAGGCGGCG
AACGACTCCA ACTCCGCGTC CGACCGCGAG GCCCTGAACA ACGAGGCCCA GCAGCTCGTG
GCCGAAATCA GCCGCGTTGC CAACGAGACC GAGTTCAACG GCGACGCCAT CCTGGATGGG
GCGTTGAACG ACATCTTCTT CCAGATCGGG GCTAACCAGG GGCAGAACAT CGCGGTGTCC
GGTGCGGATG CTCGCGCGAC CGAATTGGGC CGAGTGATCG CCGAGGGTAG CGAAGGGCTC
ACGCAGACTC AGATTAATGA TGTGGGCATC GAAGAGATCA ACAACATCAC GATCAACTTG
GAGCAGGTAG GGGTACTTGG CGAAGGAGAG GACAACGATC TCGGGGTTGA GCTGGAGGTC
GACCTGGAAG GGATGGGGGT TAATACGCTG GAGGATGCAG TTCGCGAAAT TAACGCGGCG
ATCGCTTCTC CGGATCCGGA CAATGAAAAT GTGGGGAGTT TTGTTTCTGG CGAAGACCTT
GATGACGAAG AAGCCATGGC GGCATTGCGA GATGCGGGCC TGAGTGCCGC ACTCGTCACC
AATGACGATG GTGAAACCAC GATCGCGATT CGCGGAAACT TTGACACAGA GTTTTCGGTG
GATGGTGGCG GTGTGACCCT AGAGGGAGGC GACACTACCG ATCCTGATGT GACGCTATTC
GATTCTGATG GTGATGGAGC TGCGGTGGAT GGTCAGACCT TGAATCTCAC AGATGTGGAT
ATCGCGTCGC GTTCGGGGGC CACCGAAGCC CTGGCTGTAG TGGATGGTGC CCTAGACCAA
GTCAATTCCC TGCGAGCCGA CCTGGGCTCT ATTCAGGTGC GTTTCGAAAA CACCATCGCC
AACCTGGAGA TCTCCTCGGA GAACCTCGAT GCGGCCCGAT CCCGAATCCG GGATGCCGAC
TTCGCCGAGG AAACCGCGGA GCTGACCCGT GCCCAGATCC TGCAGCAGGC GGGGACCTCC
GTACTGTCGC AGGCGAACGC CACGTCGCAG AACGTGCTGG CACTGCTGCA GTAA
|
|---|
| Protein sequence | MSQVINTNIL SLNAQRNLSQ SQGALGQSLE RLSSGLRINS AKDDAAGLAI SERFSTQING
LNQAVRNAND GISFSQTAEG ALSTVGDALQ RIRELSVQAA NDSNSASDRE ALNNEAQQLV
AEISRVANET EFNGDAILDG ALNDIFFQIG ANQGQNIAVS GADARATELG RVIAEGSEGL
TQTQINDVGI EEINNITINL EQVGVLGEGE DNDLGVELEV DLEGMGVNTL EDAVREINAA
IASPDPDNEN VGSFVSGEDL DDEEAMAALR DAGLSAALVT NDDGETTIAI RGNFDTEFSV
DGGGVTLEGG DTTDPDVTLF DSDGDGAAVD GQTLNLTDVD IASRSGATEA LAVVDGALDQ
VNSLRADLGS IQVRFENTIA NLEISSENLD AARSRIRDAD FAEETAELTR AQILQQAGTS
VLSQANATSQ NVLALLQ
|
|---|
| |