Gene TK90_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1425 
Symbol 
ID8807191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1514799 
End bp1516250 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content65% 
IMG OID 
Productdiguanylate cyclase with PAS/PAC and GAF sensors 
Protein accessionYP_003460666 
Protein GI289208600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTA AAGATCAGGA CCAGTTCAAC GCGCTGATCG TCGAGAACGC AGCGGTCTGG 
ATCAATTCAC TGGATGTAGA CGGCCGCATC ACCTTCTGGA ACCGTGCGGC CGAGCAGATT
AGCGGCTACT CCCGCGAGGA GGTGCTCGGG CACGACCGCG TCTGGGAATG GCTGTATCCC
GAGCCCAACT ACCGCGAGGC GGTCTTTGCC CGCGCCCGCC AGATCATGCA GCTGGGCAAG
GGCCTGCAGG GCTTCGAGAG CACAATCCGC ACCCGCGCCG GCGACGACCG AACGCTGGAG
TGGCACTCCG AGCAACTGTT CGCAGCAGAC GGGCAATTGC TTGGGGCAAG CGCCGTCGCC
ATCGACATCA GCGACCGTCG CCGTCTGGAG ACCGCCCACG ATCGGCAATA TCGCCTGCAG
GGCATGATCG CCGAGATCTC CGCCGCACTG ATCAACATCA CGGCCGAAGA CATCGACCGG
GTCGTTGAAG AGAGCCTGTC CCGGCTGGGA AACTTCTTCG GCCTCGGGCG CGCCTACGTA
TTTCGTTTCG ATCTCCCCGC CGGGCAGATG AGTCTGGTGA ATGAATGGTG CGCACGCGGC
GTACAAGCTT ACCGCGACCA CCTCCAGGCG ATTCCACTGC ACGAACACAA CTGGGTCACC
TCACAGATCC TCGCGAGGAA GGTCGTGCAC GTGCCAGACG TCCACGAACT TCCGGCAGAA
GCGGCGGTGG AACAGGAGGA ATTCCGTCGC GAACAGATCC GGTCCCTGCT GCTGATCCCC
CTCGTCAGCG ACCAGAATGC GTTCGGCATG CTTGGATTCG ATGCCGTGGA GGCGCCGCAT
CGCTGGACCG ACGATCAGAT CACCGCGCTG CGGCTGGTCG CCGACATGAT CGCCGGCACC
CTGGCGCGCA AGCAGGTGGA GCAGGAACTG GCACGCCAGG CGCGCGTGGA CGGGCTGACC
GGCCTCGCCA ACCGCCGCGA GTTCGACCAC CAACTCGAGC GGGAATGCGC CGCCCGACGC
GAGCGCTCCC TCTCGCTGCT GATGATCGAT ATCGACCATT TCAAGCCATA CAACGACGCC
TTCGGCCACC AGGCCGGGGA TGACTGCCTG CGGGCGGTGG CCGACGTGAT CCGCTCGATA
CTGAACCGCC CCGCCGATGT CGGCGCCCGC TACGGTGGCG AGGAATTCGC CTGCGTACTG
GCCGATACCA ACCCTGAGGG AGGGCTGCGG GTCGCCGAAC GCATCCGCGA GGCGGTGTAC
GGGCTCGACC TGAAACAGCC CGACACCGAC GAAGGGCGCG TCACCATCAG TATTGGCGTG
TGCAGCGTCC ACACCCGGTG GCCCGTGGAG CCCAGGGCTC TGCTGCGCCA GGCAGACGAA
GCGCTCTACC GCGCGAAACG CGCCGGCCGC AACCGGGTCG AGGCACTGAC GCTGCCCGAG
GCCTCCTGGT AG
 
Protein sequence
MAFKDQDQFN ALIVENAAVW INSLDVDGRI TFWNRAAEQI SGYSREEVLG HDRVWEWLYP 
EPNYREAVFA RARQIMQLGK GLQGFESTIR TRAGDDRTLE WHSEQLFAAD GQLLGASAVA
IDISDRRRLE TAHDRQYRLQ GMIAEISAAL INITAEDIDR VVEESLSRLG NFFGLGRAYV
FRFDLPAGQM SLVNEWCARG VQAYRDHLQA IPLHEHNWVT SQILARKVVH VPDVHELPAE
AAVEQEEFRR EQIRSLLLIP LVSDQNAFGM LGFDAVEAPH RWTDDQITAL RLVADMIAGT
LARKQVEQEL ARQARVDGLT GLANRREFDH QLERECAARR ERSLSLLMID IDHFKPYNDA
FGHQAGDDCL RAVADVIRSI LNRPADVGAR YGGEEFACVL ADTNPEGGLR VAERIREAVY
GLDLKQPDTD EGRVTISIGV CSVHTRWPVE PRALLRQADE ALYRAKRAGR NRVEALTLPE
ASW