Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1425 |
Symbol | |
ID | 8807191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1514799 |
End bp | 1516250 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | diguanylate cyclase with PAS/PAC and GAF sensors |
Protein accession | YP_003460666 |
Protein GI | 289208600 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTTA AAGATCAGGA CCAGTTCAAC GCGCTGATCG TCGAGAACGC AGCGGTCTGG ATCAATTCAC TGGATGTAGA CGGCCGCATC ACCTTCTGGA ACCGTGCGGC CGAGCAGATT AGCGGCTACT CCCGCGAGGA GGTGCTCGGG CACGACCGCG TCTGGGAATG GCTGTATCCC GAGCCCAACT ACCGCGAGGC GGTCTTTGCC CGCGCCCGCC AGATCATGCA GCTGGGCAAG GGCCTGCAGG GCTTCGAGAG CACAATCCGC ACCCGCGCCG GCGACGACCG AACGCTGGAG TGGCACTCCG AGCAACTGTT CGCAGCAGAC GGGCAATTGC TTGGGGCAAG CGCCGTCGCC ATCGACATCA GCGACCGTCG CCGTCTGGAG ACCGCCCACG ATCGGCAATA TCGCCTGCAG GGCATGATCG CCGAGATCTC CGCCGCACTG ATCAACATCA CGGCCGAAGA CATCGACCGG GTCGTTGAAG AGAGCCTGTC CCGGCTGGGA AACTTCTTCG GCCTCGGGCG CGCCTACGTA TTTCGTTTCG ATCTCCCCGC CGGGCAGATG AGTCTGGTGA ATGAATGGTG CGCACGCGGC GTACAAGCTT ACCGCGACCA CCTCCAGGCG ATTCCACTGC ACGAACACAA CTGGGTCACC TCACAGATCC TCGCGAGGAA GGTCGTGCAC GTGCCAGACG TCCACGAACT TCCGGCAGAA GCGGCGGTGG AACAGGAGGA ATTCCGTCGC GAACAGATCC GGTCCCTGCT GCTGATCCCC CTCGTCAGCG ACCAGAATGC GTTCGGCATG CTTGGATTCG ATGCCGTGGA GGCGCCGCAT CGCTGGACCG ACGATCAGAT CACCGCGCTG CGGCTGGTCG CCGACATGAT CGCCGGCACC CTGGCGCGCA AGCAGGTGGA GCAGGAACTG GCACGCCAGG CGCGCGTGGA CGGGCTGACC GGCCTCGCCA ACCGCCGCGA GTTCGACCAC CAACTCGAGC GGGAATGCGC CGCCCGACGC GAGCGCTCCC TCTCGCTGCT GATGATCGAT ATCGACCATT TCAAGCCATA CAACGACGCC TTCGGCCACC AGGCCGGGGA TGACTGCCTG CGGGCGGTGG CCGACGTGAT CCGCTCGATA CTGAACCGCC CCGCCGATGT CGGCGCCCGC TACGGTGGCG AGGAATTCGC CTGCGTACTG GCCGATACCA ACCCTGAGGG AGGGCTGCGG GTCGCCGAAC GCATCCGCGA GGCGGTGTAC GGGCTCGACC TGAAACAGCC CGACACCGAC GAAGGGCGCG TCACCATCAG TATTGGCGTG TGCAGCGTCC ACACCCGGTG GCCCGTGGAG CCCAGGGCTC TGCTGCGCCA GGCAGACGAA GCGCTCTACC GCGCGAAACG CGCCGGCCGC AACCGGGTCG AGGCACTGAC GCTGCCCGAG GCCTCCTGGT AG
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Protein sequence | MAFKDQDQFN ALIVENAAVW INSLDVDGRI TFWNRAAEQI SGYSREEVLG HDRVWEWLYP EPNYREAVFA RARQIMQLGK GLQGFESTIR TRAGDDRTLE WHSEQLFAAD GQLLGASAVA IDISDRRRLE TAHDRQYRLQ GMIAEISAAL INITAEDIDR VVEESLSRLG NFFGLGRAYV FRFDLPAGQM SLVNEWCARG VQAYRDHLQA IPLHEHNWVT SQILARKVVH VPDVHELPAE AAVEQEEFRR EQIRSLLLIP LVSDQNAFGM LGFDAVEAPH RWTDDQITAL RLVADMIAGT LARKQVEQEL ARQARVDGLT GLANRREFDH QLERECAARR ERSLSLLMID IDHFKPYNDA FGHQAGDDCL RAVADVIRSI LNRPADVGAR YGGEEFACVL ADTNPEGGLR VAERIREAVY GLDLKQPDTD EGRVTISIGV CSVHTRWPVE PRALLRQADE ALYRAKRAGR NRVEALTLPE ASW
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