| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1403 |
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| Symbol | |
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| ID | 8807169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1495487 |
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| End bp | 1496725 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_003460644 |
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| Protein GI | 289208578 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.561856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGGT TCGAGTCGGT ACAACCGTTG GCCGCGAATA TCCGGTATTC CGACTATCTG
GCTCGAACCA CGCTTCGCGC CTGGGTCGGG ATGTCCTTTT TATCCGCGAC GCTGATCATC
GTCGCCGGCC TGTTGATCTC CTGGTTAATG CCGTACCTGG CGGGTGGCGC CGACAGCATC
GTGCCGCACT TCTACTACGT GCCGATCCTG TTTGCCGCCG CGCGCTTTGG TCCCGGCGCC
GCCCTCATCG TGGCACTGGT GGCCGGCGTA CTCGCCGGTC CGCTGACCTA TGTCGATGTC
GCGGCCGCTA CCGCACAGGA GACGGAACGC TGGCTGACGC GCACTGCCTT CTTCGTCGGC
ATCGGGCAAT TGATGGCCTG GCTGGTCATT CCCGCGCTGC ACCCGGTCAC CGAAGAGCTC
CGGCGCATGC GCCAGGAGTT CGACATCCGC CGAGGGCTGA AACACAACGA ATTCTTTCTG
CGCTACCAGC CGATCTATTC GCTCCGCCAG CGCCGTTTTG TCGGGGTCGA GGCGCTGATT
CGCTGGCAGC ACCCCGCACA CGGCGAACTC GCTCCAGCGG ACTTTCTCGA CGTGGCGGAG
GACTCCTCCC TGATCCATGA CATCGGCGAA CTGGTAATCG CCGAAGGCTG CCGGCAGGCC
GAGGAATGGG CGACCCTCGC GCGGGAGCAG GGCCGCGGAC CCTGGTACAC CGCGATCAAT
CTCTCCGCCC GGGACCTGGT TCGCCCCGAG CTCGCATACG ACGTCGCGTC GGCACTCAAT
CGCCACCACC TGCCGCCTGA ACTGCTAACC ATCGAACTCA CCGAGAGCGT TCTCGCCCTG
GAGGATGCCG AGCCCGCCCT CGAGGCCCTG AAACATCTGG GGGTGCATCT TGCCATCGAT
GATTTCGGCA CTGGGTATTC GTCCCTCGCC TACCTCAACC GCTTCCCGAT CGACACGCTT
AAACTCGACC GGCAGCTGGT GTCCCGTCTC GGTCATGACC CTTCGGCCGA AGATCTCGCA
CGAGGCATCG TACTGCTGGC CAGTTCCCTC GGGCTGAAGA TGGTCGCCGA GGGCATCGAA
ACCCTCGAAC AGGTCGAGCG CGGCCAGGAA CTCGGCTTCG ATCTGATTCA GGGGTTCTAT
TTTGCGCGGC CGCTGACCGC AGACCAGATC CCCTCGCTCC TGATGATCGA CAACGTCGAT
CCGGACCATC CCCCAACGCC GGAGGCAACA CGCGCGTAA
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| Protein sequence | MSRFESVQPL AANIRYSDYL ARTTLRAWVG MSFLSATLII VAGLLISWLM PYLAGGADSI
VPHFYYVPIL FAAARFGPGA ALIVALVAGV LAGPLTYVDV AAATAQETER WLTRTAFFVG
IGQLMAWLVI PALHPVTEEL RRMRQEFDIR RGLKHNEFFL RYQPIYSLRQ RRFVGVEALI
RWQHPAHGEL APADFLDVAE DSSLIHDIGE LVIAEGCRQA EEWATLAREQ GRGPWYTAIN
LSARDLVRPE LAYDVASALN RHHLPPELLT IELTESVLAL EDAEPALEAL KHLGVHLAID
DFGTGYSSLA YLNRFPIDTL KLDRQLVSRL GHDPSAEDLA RGIVLLASSL GLKMVAEGIE
TLEQVERGQE LGFDLIQGFY FARPLTADQI PSLLMIDNVD PDHPPTPEAT RA
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