| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1402 |
|---|
| Symbol | |
|---|
| ID | 8807168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1493687 |
|---|
| End bp | 1494994 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_003460643 |
|---|
| Protein GI | 289208577 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGCAA ATGCCACCCG GCTCCCCACC CAGGGGGCAC CCCTTGCGGT TTCCCGCGAC
GACGCCACGG CGATACTCGC GGCCGTCCGC GATGCCGTCG CCTATATCGA ATTTGCGCCG
AACGGTACGG TGCTCGACGC CAACTCGCAC TTCCTCGAGA CCGTCGGTCA CCCCCGCGAG
GATGTGATCG GCCAGCACCA TCGGATGTTC TGCGACCCGG CCTATGTTCG CTCCATGGAA
TACCGGCAGT TCTGGCAGCA GCTGGCTGCG GGCGAGTCCC ACGCCGGCAC CTTCCCCAGG
GTCACGCGAG CTGGCGAAAC CATCTGGCTG GAGGCCACCT ACTTTCCGGT ACGCGATGCC
CGGGGCGAGG TGTACAAGGT CGTCAAAATC GCATCGAATG TGACCGGCAA GATGGAGACG
CTCCACGACC AGGCAGCCGT ATTCGAGGCG CTGGATCGCT CCCAGGCGGT CATTGAGTTC
ACGCCGGACG GCACCATCCT CAAGGCCAAC GACAACTTCC TGCAGGCCGT CGGTTACCCG
CTCGAACACA TTCAGGGCCA GCACCACCGG ATGTTCTGCG ACGACGCCTT CTACCGCGAG
AACCCGAATT TCTGGCGAGA CCTCGCCGGC GGGCGCTTCA TGAGCGGCAA ATTCCGCCGT
TTCAAGTCCT CCGGCGAGGA GATCTGGCTG GAGGCCACCT ACAACCCGAT CCTCGATGAC
CAGGGCCGCA CCGTGAAGGT CATCAAGTTC GCCACAGACA TCACCGCCAG CGTGCACATG
GCCGAGCGCA CCCGGGAGGC CTCCGCCATC GCCTGCGAAA TGGCCCAGAA AACGGCGGAT
GGCGCGCAAC GTGGGGAGGC CTCGCTGGAG GCCAACGCGA CCAACTCCGA ACAGATCCGC
CAGCATGTGG CCGAAACCAA ATCGGCGATC GATCGACTCA ATGCCGAGGC GCGCAGCATC
GAATCAATCA TCGAGACCAT CCGCAGCGTG GCGGAGACCA CCAAGATGCT GTCCCTCAAT
GCCGCTATCG AGGCCGCGCG TGCCGGCGAG CAAGGGCGCG GCTTTGCCGT GGTGGCACAG
GAGGTCCGCA AGCTCGCGTC CGATACACGC GACGCCACCA GTCAGATCGC CGAGGTCATT
CATGGCAACC TGCAAGGCAC CCAGGCGATC GCCGAGCGTA TCGACACTGT GAACAAGGTG
GCGGAACAAG GGCGCCAACA GGTCCTGTCG GTACAGCAGA TCATGGCCGA AATTCGCGAA
GGCGCCAGCC ATGTTGTTCA ATCGGTTTCC TCGATCCCGC GCATCTGA
|
|---|
| Protein sequence | MCANATRLPT QGAPLAVSRD DATAILAAVR DAVAYIEFAP NGTVLDANSH FLETVGHPRE
DVIGQHHRMF CDPAYVRSME YRQFWQQLAA GESHAGTFPR VTRAGETIWL EATYFPVRDA
RGEVYKVVKI ASNVTGKMET LHDQAAVFEA LDRSQAVIEF TPDGTILKAN DNFLQAVGYP
LEHIQGQHHR MFCDDAFYRE NPNFWRDLAG GRFMSGKFRR FKSSGEEIWL EATYNPILDD
QGRTVKVIKF ATDITASVHM AERTREASAI ACEMAQKTAD GAQRGEASLE ANATNSEQIR
QHVAETKSAI DRLNAEARSI ESIIETIRSV AETTKMLSLN AAIEAARAGE QGRGFAVVAQ
EVRKLASDTR DATSQIAEVI HGNLQGTQAI AERIDTVNKV AEQGRQQVLS VQQIMAEIRE
GASHVVQSVS SIPRI
|
|---|
| |