Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1393 |
Symbol | |
ID | 8807159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1486623 |
End bp | 1487438 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003460635 |
Protein GI | 289208569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCTGC TGTGCCGGAC CCTGCGGGTC TCCCGGAGTG GATTCTACCA ATGGCGCCAG CGCGAGGATG CGGCTGATCC GATCCATGCC GAGCTGCTGT GGCATGTGCG TTCGGTGGAC CAGCACTTAC GCCACCGAGC GGGGAGCCGC CGGATGGCAT ATGAGCTGCG CCAACGGGAC TTTGCCGTGG GACGGCACCG GGCTCGGAGC CTGATGCGGG AAGCCGGTCT CGAGTGTCAG CAGCGCCGTC GGCGGTGGAT CTCGACGACC GACAGTCAGC ACCGCTTACC GGTGGCCCCG AACGTGCTGC GGCGCCAGTT CCGGGCTGAA GGGCCCAACG AGATCTGGGT GGCCGATATC ACGGCGCTGT GGACCTTCGA AGGCTGGGTC TATCTGGCGG CGATCCTGGA CCTGTATGAC CACCAGGTCA TCGGTTATGC CCTGGCCGAC GGCATGCCGG TGGAGCTGAC CCTGGAGGCG CTGGAGATGG CGGTCCGGCA CCGGCGACCG GCGCCGGGGC TCATCCATCA CTCGGATCAG GGTAGCCAGT ATGCCGCCAC GCGCTACCAG GAACGGCTGG ATGCGTTGGG CTTCGTGCCC TCCATGAGCC GCAAGGGCAA CTGCTGGGAC AACGCGGTGA TGGAGCGCTT CTTCGGCGCA CTGAAAAGCG AGTGGACCGA CGCCCGGACC TACCGTACCC GCGAGGCCGC CCGACTGGAT GTCGTGGAGT ACATCGAAAT GCAGTACAAC AGCGTCCGAC CCCACACGGC CCTGGGCCAA CTTACCCCCC GGGAGTGGGA AAAGGCTGTT GCTTAG
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Protein sequence | MTLLCRTLRV SRSGFYQWRQ REDAADPIHA ELLWHVRSVD QHLRHRAGSR RMAYELRQRD FAVGRHRARS LMREAGLECQ QRRRRWISTT DSQHRLPVAP NVLRRQFRAE GPNEIWVADI TALWTFEGWV YLAAILDLYD HQVIGYALAD GMPVELTLEA LEMAVRHRRP APGLIHHSDQ GSQYAATRYQ ERLDALGFVP SMSRKGNCWD NAVMERFFGA LKSEWTDART YRTREAARLD VVEYIEMQYN SVRPHTALGQ LTPREWEKAV A
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