| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1368 |
|---|
| Symbol | |
|---|
| ID | 8807134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 1460770 |
|---|
| End bp | 1462137 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003460610 |
|---|
| Protein GI | 289208544 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.553065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGAA CCACGTACAT ACACGCCTGG CCCGCCCTCG GCATCCTTGC CGGGTTGGCT
CTCGCGTTTG GGCCCACACC CACCCTCGCG GACGAGGAGC CCCACACCCG AATCCTCTGG
CAGGATCCCG TCGAGGTCGC CCGTGGCGAA GCCTACCGAG GCCCCTGGCG CATGAATGCC
TCCGACTTTC GCTATGTGGA CGATGCCTCG GTGGCGATCA ACGACCACGG CGACGTGGTC
GTCGTCTGGG TTGACCAGGT GGAGCAGGCG ATCTTGCTGC AACGCTACGA CCGCGACGGT
CAGGCGGTCC TGGACGAACC CACTCGCATC GGCGGCGAGC CCGACACCTT CTCCTGGCTG
CCGCGCGTCG CGATCGAGCC GGTGCCGGAT GACGAGGACG AATTCACCGT TCACCTGCTC
TGGCAGGAGA TCCTGTTTAC CGGTGGCGAC CACGGCGGGG AGATCCTCTA TGCCCGCTCC
CGGGACGGCG GCCGCTCGTT CGAGGATCAT CAAAACCTGT CGAACTCGCG CGACGGGGCC
GGCAAGGGAC GCATCACCGC ACATCGCTGG GACAACGGCA GCCTGGATCT GCTGCTGGCC
GCGGAGGGTC AGGTCGTCGC GGCCTGGACC GAATACCGGG GTCCGTTGCG CGTCACCTAT
TCGTCCGACA ACGGCGAGAG CTTCGCGGAA CCCGAGACGG TCAACGACGG CGCCGAAAAA
CCGGCCCGCG CACCGAGTCT GGCCCAGACC CCCTCCGGGC GCGTCCTGCT GGTCTGGTCG
GAGGGCGACG ATCCGTATGC CGACCTCCGC ATTGCCACCT CGGAGGAGAT GGGCCAAGGC
TTTTCCGCTC CCACAACAGC CCTGGAAACC CCGGGTCATG CCGATGCGCC TTCGCTCGTG
GTGGATGATG ACGGCACCGT GCACCTCGCC TTCGGCGCGA TCCCCGCAAA CGACCTGGAA
GACTACCGCC AGCCCTACCA CCGCCGACTG CATCTCGCCC AGGCCGATGC CGACAGCCTG
GAGTTCACCT CGGCGAAGAA ACTGGACGCG GACGACTGGG CGGGCGGCTT CCCTACGCTG
GCCCGCTCCG CCGACCGGCT CTATCTCGTC TGGCAGCGCT ATCAACACCC GACCGACCGC
CCGTACGGCC TCGCGTTTAC CCACGCCCCA CTGGACACCC TGGAGTTCGC GCGCGTCGAG
CCCGTCCCGG GGACCGTCGA CCGGCCCTAC AGCGGCGGGC TTCAGGGGCA GCTGAAACGG
CGGATGGCGG TCAACGCGGC TGGCGAGATC GCGATTGCCC AGAGCCGCTT TGTCCCCGGT
AGCCACAGCG ACATCCTGTT GATCCGCGGA CAGGCGCAGG ACCGCTGA
|
|---|
| Protein sequence | MPRTTYIHAW PALGILAGLA LAFGPTPTLA DEEPHTRILW QDPVEVARGE AYRGPWRMNA
SDFRYVDDAS VAINDHGDVV VVWVDQVEQA ILLQRYDRDG QAVLDEPTRI GGEPDTFSWL
PRVAIEPVPD DEDEFTVHLL WQEILFTGGD HGGEILYARS RDGGRSFEDH QNLSNSRDGA
GKGRITAHRW DNGSLDLLLA AEGQVVAAWT EYRGPLRVTY SSDNGESFAE PETVNDGAEK
PARAPSLAQT PSGRVLLVWS EGDDPYADLR IATSEEMGQG FSAPTTALET PGHADAPSLV
VDDDGTVHLA FGAIPANDLE DYRQPYHRRL HLAQADADSL EFTSAKKLDA DDWAGGFPTL
ARSADRLYLV WQRYQHPTDR PYGLAFTHAP LDTLEFARVE PVPGTVDRPY SGGLQGQLKR
RMAVNAAGEI AIAQSRFVPG SHSDILLIRG QAQDR
|
|---|
| |