| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1345 |
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| Symbol | |
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| ID | 8807111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1434238 |
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| End bp | 1435110 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003460588 |
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| Protein GI | 289208522 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.515489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.2022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCGG AACAGCTCAG CATCGAGTCC CTGCAGGCCT TCGTGGCGGT GGTCGATACC
GGCGCCTTCT CCGCCGCGGC CGAGCGGCTG TACCTGACCC AGCCGGCGAT CAGCAAGCGC
ATCCAGTCGC TGGAGGCGAC GCTGCAACGC CCGCTGTTCG AGCGCCAGGG GCGCCGCGTG
CGGCCCACCG AGGTCGCCGA ACGCCTGCTA CCCGAGGCCC GCGAGATCCT GGCCCGCCTG
CACGCCATCG AGCAGCAGGT GGCGGACCTC GACCACGTCG TGCGCGGCCG CATCCGCCTC
GCCACCTCGC ACCACATCGC CCTGCACCGC CTGCCCGCCC CGCTGGCCGC TCTGCGCACC
CGCTACCCCG AGCTGGAGCT GGAACTCGCG TTCATGGACT CCGAGGCCGG CATCGAGGCC
GTCATGCACG GCGACGCCGA TCTGGCCCTG GCCACCCTGC CCGAGGATCT GCCGAAGGCC
GCCGACGCAC ACACCGTCTG GACCGATGAG CTTGTTCCAA TGATCGCCCG CGGCCGCGCC
CAGGATGCCC CGCTGGAGAC GCTGCAACGG CTGCATGACT GGCCGGCGAT CCTGCCGCCG
GCGGGCTCCA CCACCCGCCG CCAGATCGAC CAGGCCCTGG CCGCACAGGG CCTGCACGCC
GCCGCGGCTC AGGAAAGCCC GTACCTGGAG GTCATCCGCA TGATGATCGC CGCCGGCCTC
GGCATCGGCT TCCTGCCCCG CACCATGGCC ACCGACGACC TGACCATCCT CGAATGGCCC
GCCCCACCCA TCACCCGCCA GCTCGGCTGG GTTCGCCACG CGGACCGCTA CCGCTCGCGA
ACCCTCGAGG CAGTCATCGA GGAATTACCG TGA
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| Protein sequence | MRPEQLSIES LQAFVAVVDT GAFSAAAERL YLTQPAISKR IQSLEATLQR PLFERQGRRV
RPTEVAERLL PEAREILARL HAIEQQVADL DHVVRGRIRL ATSHHIALHR LPAPLAALRT
RYPELELELA FMDSEAGIEA VMHGDADLAL ATLPEDLPKA ADAHTVWTDE LVPMIARGRA
QDAPLETLQR LHDWPAILPP AGSTTRRQID QALAAQGLHA AAAQESPYLE VIRMMIAAGL
GIGFLPRTMA TDDLTILEWP APPITRQLGW VRHADRYRSR TLEAVIEELP
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