| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1339 |
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| Symbol | |
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| ID | 8807105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1425507 |
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| End bp | 1427987 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | FimV N-terminal domain protein |
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| Protein accession | YP_003460582 |
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| Protein GI | 289208516 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.866454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.334377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACAAGT TACTACTCGG GCTACTGCTC TTGCTGCTGG TTGCACCGGC ATCATCGAAT
TCGGTGAGTT TTGGTGAGGT CAACCTGCAA TCCCATCTGA ACCAGACCTT GCGGGCGGAG
ATTCCGCTGC GAGGCGGTGC CGCGGCCAGT GATTCGCTAC AGGTGCGTCA GGCTTCGGAA
AACGAATACC GGCGCGCCGG CATGAGCCGC GGCAGCGTGC CGGGCGACCT GAACATCCAG
GTTCAGGGTG AGGGGGCGGA TCGCCGGGTG ATGCTGACCA CGCGCCAGCC GGTGCGCGAG
CCGTATGTGG GCATCCTCCT CGAGGCCCGC TGGGATGGCG GGCGCTCAAT GCGTGAAGTC
TCCCTGTTGC TTGATCCGCC GGACACCATG CCTTCCGGGG CGGCCGCTCC GGTCCCGCGT
GACACCGCCC GGGAGGCGCC GCGTCGACAA GAGGCGCCAA TGCCGCGTGA AGGTGAGGCC
TACACCGTGC GTAGTGGCGA TACCCTTTAT CGCATCGTGG AGCGCGCGGG TCTGGCCGGC
ATGGCGGATC AGGCGATGCT GGCGTTCCTG GAGGCCAACC CCGACGCGTT TTCTGACGAG
AACATCAACA GCCTGCGCGC GGGCGCTGAA CTGACCGTCC CGTCGCGCTC GGAGCTGGAG
TCGCGTAGTG CGGCCGAGGC GCGCCAGGAA GTGCAGCGAC AGGTTCAGGC CTGGCGCGAG
GGAACGGTGA CCGCAGCTCG CGAGGAACCC CAGCCTGAGG AAGCCGCCGA GGCCGAGCCG
GAAGTCGAGG CGGTCCCGGA AGAGGATGAG GCGGTAGCGG AGGACGATGA GGCCGTGTCC
GAGGACGACG AGGCCGCCGC GGATGATGCC GTGGCCGCGA CGGACGAGGA CGATGAAGCG
GCGGCGGCCG ACGACCGCCT GGAGATCGTG ACAGAACTCC TGCCGGAGGC GGATGAAGGG
GCGGCGGCCG CGGCCGATCC CCCCGATCTG CTCCAGGAAG CCATGCTGTC CCAGCGCGCC
GAGATGGAGG GGATGCGCGA GCAGATCACC GAACTGCGCG AGGAACTGGG TGAGCGTGGC
CGCCTTGCGG AGCTTTCGAG CGAGAACATG GCGGAGCTTG AGGAGCAGCT GAGCCAGCTG
CGGGCGGAAC GCAATGAACT GATGGCACGG CTCGATCGGG CAGATGCCGA ACGCAATGCG
CCGCTGCACG AGCGGATCAT GAATGATCCG CTGCTGCTGA TGATGGCGAT TGCGCTGGTA
ATCCTGCTGC TGCTCGTGTT GCTGGCCTTT GCGCGTGGTG GTCGGCGCGA AGTGGTGGTT
GAAGAGCGTG CTTCCGGCAT GCCGGCGCGG GCGGACAACA GCGGTGTGTG GGCCGCGGCG
GCGGATCCCG CCGGCTACGA GGCACGTGAG ATCGATAGTG CCGGCGCGGG ATCGGGCGGC
GCCACTACTA CAGCCGTAGC CGGCGGGGCT GCTGCGGGCC TGGCGGCCGG AGCTGTGGCG
GGCAAGGACG ATGATCGCGA ACCGCTGGCG GATTCGGACG AGCCAGAGGA GTCGGTGAGT
GAGCCTGTAG TGGTGAGCTC CAGTGGCGAT GCCTCGGTGG ACGACGTGCT GGCCGAAGTG
GATGTTTGCC TGGCCTACGG GATGAATGAT CAGGCCGAGG AGACCCTGAC CCAGGCCATC
GAGGGCGACC CGGACAATAC CCAGTATCGT CTGAAGCTCG TCGAGGCGCG CGTGGCGCTG
GGCGACGAAG AAGGCGCCCG CGAGGCGGCA TCCAACCTGC GCGAACGCCT CCCGGCGGAC
GATGTTGAAA CGCGCAATCA TCTGGCGGAG CTGGAATCGC GCATCGGTGG TGCTGGTGAT
GACAGCGCAG GGCCCGCGGG CGCTCCGGCG GGGGTAGAAG GTCTGGGCGC TGCGGTGGAG
CCGCAGGCGG CAGATGACGG CGAAGCACCG AACGAGATCG ATTTCTCCGG CCTGGATCTC
CCGGATGTGC AATCCGAAGC CGAAGATCTC GGTAACACCG CCGAGCCGCA GGAAGAGACG
GACTCCGGGC TGACCTTTGA TTTTGACGAG ACCTTCGATG AAGGGGCTTC GACGCCAGCG
GAGCAGACCC CTTCGGAGAC GGACGAAGCG CGCAGCGATG ACCTGAATGA CTTGTCGTTC
GATATCGACG ACAGCGACCT GCCGAACCTG GATGAAGAAA CCCGGGAGGA TGCGGCCGGG
AGTGATATCC CGGCACTGGA TCTGGGCGAC GAGGACCTGC CGGCTGCGGG CCAGGAAGAT
GCCTTGCCGC GAGAGGACGG AGAGTCCTCG CCCATCGGCG CCGACGAAGA CAATGAAACG
CGCCTGAGCC TGGCGCAGGC CTATGCGGAC ATGGGCGATG ACGAAGGTGC TCGCGAACTG
ATCGACGAGA TCGTGGCCAC CGGGTCGGAG GATCAGAAGG CGAAGGCTGA GGCGATTCGT
CAGCAGCTGG AGAGCTCCTG A
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| Protein sequence | MHKLLLGLLL LLLVAPASSN SVSFGEVNLQ SHLNQTLRAE IPLRGGAAAS DSLQVRQASE
NEYRRAGMSR GSVPGDLNIQ VQGEGADRRV MLTTRQPVRE PYVGILLEAR WDGGRSMREV
SLLLDPPDTM PSGAAAPVPR DTAREAPRRQ EAPMPREGEA YTVRSGDTLY RIVERAGLAG
MADQAMLAFL EANPDAFSDE NINSLRAGAE LTVPSRSELE SRSAAEARQE VQRQVQAWRE
GTVTAAREEP QPEEAAEAEP EVEAVPEEDE AVAEDDEAVS EDDEAAADDA VAATDEDDEA
AAADDRLEIV TELLPEADEG AAAAADPPDL LQEAMLSQRA EMEGMREQIT ELREELGERG
RLAELSSENM AELEEQLSQL RAERNELMAR LDRADAERNA PLHERIMNDP LLLMMAIALV
ILLLLVLLAF ARGGRREVVV EERASGMPAR ADNSGVWAAA ADPAGYEARE IDSAGAGSGG
ATTTAVAGGA AAGLAAGAVA GKDDDREPLA DSDEPEESVS EPVVVSSSGD ASVDDVLAEV
DVCLAYGMND QAEETLTQAI EGDPDNTQYR LKLVEARVAL GDEEGAREAA SNLRERLPAD
DVETRNHLAE LESRIGGAGD DSAGPAGAPA GVEGLGAAVE PQAADDGEAP NEIDFSGLDL
PDVQSEAEDL GNTAEPQEET DSGLTFDFDE TFDEGASTPA EQTPSETDEA RSDDLNDLSF
DIDDSDLPNL DEETREDAAG SDIPALDLGD EDLPAAGQED ALPREDGESS PIGADEDNET
RLSLAQAYAD MGDDEGAREL IDEIVATGSE DQKAKAEAIR QQLESS
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