| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1325 |
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| Symbol | |
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| ID | 8807091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1412018 |
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| End bp | 1414060 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_003460569 |
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| Protein GI | 289208503 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00529222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGTT CGAGCCGGCA GCATTTACCG GAGTTGCGGG GCCTGGAACT CGCGCTGCTC
GCCCTGCCAG TGGCCGCGCT GCCACATGCC TGGCACCAGC CACTGTGGGT CACGCTGCTC
GTAGCGGCCG CCATCCTGCT GCGCAGCTGG CTCCATCTGC GCGACCGCAA GCCCCCTTCC
ATCGGACTGA TGGCCCTGCT CGCCGCTTTC GCGGGCGGGC TGACGTTCCT GCAGTACGGC
ACCCTGTTCG GGCAGGAGGC AGGCACCGCC CTGCTGCTGG TCATGATGGC GCTCAAACTG
CTCGAGACCC GCAACCGGCG CGATATCGTG ATCGGGCTGT TCCTCGGCTA TTTCGTGGTC
GTCACCACCT ATTTCTTCGA CCAGTCGATG CTGATCGCCG CCTGGTCTCT GCTGTCTGCC
TGGCTGCTCA CCGCCGCCCT GGTCCAGGTG CATGCCGGGC GCCCCCTCGA ACGGCGGCGC
CTGGCGAAGC ATTCCGGCTG GATGATGGTC CATGCCTTCC CGTTCATGCT GATCCTGTTC
GTCGCCTTCC CGCGCGTACA GGGACCACTG TGGGGCGACC CGCAACGCGA CGAGGTGGCT
ACCACGGCCC TTTCCGGCGA ACTGAACCCT GGCGACATCG CGGAACTGCT GCAGGACGAA
ACCACCACCA TGCGCGTCCA GTTTCACGGC TCCGTCCCGC CGCCCCGGGC GCAATACTGG
CGGGCACTGG TGATGACGGA CTTTGACGGC CGCCGCTGGC AGGCCGAAGG GGGACAATCC
AGCATCGAGC TGCCACAGCC CGGAGACTCG GACCGCGTGG TGGCCTACAC CGCGACGCTG
GAGCCCACCC GCATGCGCTA CCTGCCGGTA CTCGACTACC CCGTGGCGCT GCCCGACAAC
GCCGAGTACC GCGACAACCA CCAGGTCGTC CGCGACCGAC GGATCGTGAA CCGCATCCAG
TACGACGCCG AGGCCGACCT GACACGTCCG CCAGGCGCCG GCGAAGCCCT GAGCAGGTCC
GCCCGTGAAC GCGCTCTTGA GCTCCCACCC AGCGCAGCCC CTCGCGCACG TGCCGAGGTC
GCTCTCTGGC GCGCCACGCA TGGTGACGAT GACCGCGCGA TCATCCAGGC CGCCCTGGAT
CGCTTCGCCG CCGCCCCCTA TCGTTACACC TTGCAGCCCC CAACGCTCGA GGGGGATGTC
ACCGACCAGT TCCTGTTCGA GACCCAGGCC GGTTACTGCG AGCACTATGC CTCCGCGTTC
GCCGTGCTGA TGCGCTCGGC GGGGATCCCG ACCCGCGTGG TTACGGGCTA CCAGGGGGGC
GAATGGATGC AGCGGGGCGA ATACCTGCGC CTGCGCAATG CCGACGCGCA CGCCTGGAAC
GAGGTCTGGC TGGATGGCGA GGGCTGGATT CGCGTCGACC CCACCGCGGC GATCGCGCCG
GAGCGGATCG AGGCCGGCAT CGGCGGCCTC ACCGGTGGCG ACGGCGAACC CATGCCCGAT
TTCCTGCGTC GTGACGGGCT GGGCTGGGTG CAGCAACTTC GATTTGGCTT CGAAGACTGG
CGCGATTTCG CCCGGTTCCG CTGGGAGAGC TGGGTGCTGG CATTCGATCC CGAGCGCCAG
CGGGAACTGT TTGCCCGTTT CGGGCTCGAC GCGACGGACT GGCGTGACAT TGTCACGGCA
CTGGGCGTCG GCTTTGGCCT GCTGGCTGCC GTGGCCCTGG TCTGGAGCGG CTGGCGCAGG
CCTCGTCGCC AGCTGGAGGT GCCGGATCGC CTCCTGCACC GACTTTCCCG GCGGATCGAA
CGCCAACAGA CAGGACTGGG ACGGCGCCCG CACGAGCCCG TCATCACCTG GACCCGACGC
GTCAAGGTTG CACGGCCGGA TCTCGCGCCC CTCGTCGATG CCTTCGCCGA GCACTACAAC
CGGGTCCGCT TCGCGCCCGC CCGGCCCGAC GACCGGGCCA GACACCTGAC AACCCTGCGC
CGCCTCGCTG CATCCGACCT TCGCAAACCC GCCGCCGACC CGCCCTTGCC GCGGACAACC
TAG
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| Protein sequence | MNRSSRQHLP ELRGLELALL ALPVAALPHA WHQPLWVTLL VAAAILLRSW LHLRDRKPPS
IGLMALLAAF AGGLTFLQYG TLFGQEAGTA LLLVMMALKL LETRNRRDIV IGLFLGYFVV
VTTYFFDQSM LIAAWSLLSA WLLTAALVQV HAGRPLERRR LAKHSGWMMV HAFPFMLILF
VAFPRVQGPL WGDPQRDEVA TTALSGELNP GDIAELLQDE TTTMRVQFHG SVPPPRAQYW
RALVMTDFDG RRWQAEGGQS SIELPQPGDS DRVVAYTATL EPTRMRYLPV LDYPVALPDN
AEYRDNHQVV RDRRIVNRIQ YDAEADLTRP PGAGEALSRS ARERALELPP SAAPRARAEV
ALWRATHGDD DRAIIQAALD RFAAAPYRYT LQPPTLEGDV TDQFLFETQA GYCEHYASAF
AVLMRSAGIP TRVVTGYQGG EWMQRGEYLR LRNADAHAWN EVWLDGEGWI RVDPTAAIAP
ERIEAGIGGL TGGDGEPMPD FLRRDGLGWV QQLRFGFEDW RDFARFRWES WVLAFDPERQ
RELFARFGLD ATDWRDIVTA LGVGFGLLAA VALVWSGWRR PRRQLEVPDR LLHRLSRRIE
RQQTGLGRRP HEPVITWTRR VKVARPDLAP LVDAFAEHYN RVRFAPARPD DRARHLTTLR
RLAASDLRKP AADPPLPRTT
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