Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1321 |
Symbol | |
ID | 8807087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1408008 |
End bp | 1408787 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003460565 |
Protein GI | 289208499 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.627863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGAGCG CGGAGCCGGT GATCAAGGTG CGCGACCTCA CCATGGGGTT TGGTGACTTT GTGCTGATGC GGGATCTCAA CTTCGACGTC CAGCGTGGGG AGATCTTCGT CATCCTCGGC GGGTCCGGGA GCGGCAAGAG CACGCTGCTC AAGCACATGA TCGGACTGTA TACGCCACAG AAGGGAAACA TCTGGGTGGC CGGTGCCGAT ATCACGACTG CCGATGGCGA AGAGCGCGAG GCGATCCTGC GCCGGGTGGG TGTGATGTAC CAGATGGGGG CGCTGTTTGG CTCCATGACG CTGATCGAGA ACGTGCGTCT GCCGCTGGAG GTCCATACCG ACCTGCCACG CGAGGCGATG GACGCGATCG CCAAGGCGCG CCTGCAGCTT GTCGGACTGG GCGAGTTCGC GGACTTCATG CCCTCGGAGA TCAGTGGTGG CATGCAGAAG CGTGCGGCGA TCGCGCGTGC GATGGTGCTG GACCCGGAAG TGCTGTTCCT GGACGAACCT TCAGCCGGGC TGGACCCGAT CACCTCGGCG GAGCTCGACC AGTTGATTCT GCGGCTGGCC CGCAGCCTGG ACATGACCAT CGTGATCGTC AGCCACGAGC TGGCCAGTAT TTTTGCGATT GCCGACCGGG TCATTATGCT CGACAAGGAA AGCAAGGGCA TCGTTGCCGA AGGGAATCCG GCGACTCTGC GTGACACATC CGATCACCCG TGGGTACAGC GGTTCCTGCA GCGGGCCGAT TCGGCCGACT CCGAAGAGAG ATCTACATGA
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Protein sequence | MASAEPVIKV RDLTMGFGDF VLMRDLNFDV QRGEIFVILG GSGSGKSTLL KHMIGLYTPQ KGNIWVAGAD ITTADGEERE AILRRVGVMY QMGALFGSMT LIENVRLPLE VHTDLPREAM DAIAKARLQL VGLGEFADFM PSEISGGMQK RAAIARAMVL DPEVLFLDEP SAGLDPITSA ELDQLILRLA RSLDMTIVIV SHELASIFAI ADRVIMLDKE SKGIVAEGNP ATLRDTSDHP WVQRFLQRAD SADSEERST
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