| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1316 |
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| Symbol | |
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| ID | 8807082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1402942 |
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| End bp | 1405113 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_003460560 |
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| Protein GI | 289208494 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATG TGGATGACCG CGAGCCGGAG TTCCCGATCG TGGATGGGGA GGGCCGTTCG
GACAGCCTTC TCGGTGGATT GATCCTGATC GCCCGCATGC ACGGGCTGCG TCTGACGCCG
GATTCCGCGC TTGCGGGTCT TCCTCTGGAC GACGGGCGGC TGTGCCCCTC CCTGGTCCCG
CGTGCGGCAC AGCGTGCCGG ACTGACCACA CGCACCGTCA CCCGCGACGC CCGCGGACTG
AAGGACGACC TGCTGCCCGC GCTGCTGCTG CTGGACCAGA ACGAAGCCTG GGTGTTGGTC
GGCTGGAACG AAGACAAGAG CGTGGCCCGA GTAATCGATC CCGAGCTGGG TGATGCGGTC
ATCGATGTGC CGCTGAAACG GCTGAAAGAG CGCTACGTAG GGCGGGCCAT CTACGTGCGG
CCCGAGTTTC GCATGGATGC CCGCGCACCG CGGGTCTCGA AGGAGAGCAA GGGGCACTGG
TTCTGGCGGG TGATTCGCGA GAACCGGCCG CTGTATCGCG ATGTGCTGAT CGCAGCGGTG
ATGATCAACC TGTTCGCGCT GGCGATGCCG CTGTTCGTGC TGAACGTGTA CGACCGCGTG
GTCCCGAACC ACGCGACCGA GACGCTGTTC ATGTTCGCGG CGGGTGTTGT GATCGTGCTG
ATCGCGGACC TGATCCTGCG CACCATGCGC AGCCACTTCG TCGACAAGGC GGCGATGCGC
GCGGACGTAA AGCTCTCATC GCACATCATG GAGCGTGTGC TGGGACTGCG CATGGAGAAC
CGGCCGGCCT CGGTGGGTTC GTTTGCGTCG AACATTGGCG CGTTCGAGTC GGTCCGCAGC
TTCATATCGT CGGCGACGAT CATCGCCTTC GTGGATCTGC CGTTTGCGTT CATGTTCATC
GCCATCATCG CGTTGATCGC CTGGCCGCTG GCGATCCCCG TGGCCATTGG CGCGCTGCTG
CTGCTGTTTT ATGCCACCGC GATCCATCGC AAGCTGCACG GACTCGCCGA AGAGAGCTAT
CGCGTGGCGG CGCAGCGCAA CTCGACGCTG GTCGAGAGCC TCACCGGTGC CGAGACGCTC
AAGGCCCTTG GGGCGGAGGG ACGGGTGCAG GCGACCTGGG AACGCGCCAC GACGCACCTG
GCCCGGACCA ATGCGCAGAA CCGACTGCTG ACCGCAAGCG TGACGCACAC GGCAATGTGG
GCGCAGCACA CGGTCGGCGT TGCCATCATC GTGCTCGGTG TGTTCCTGCT GATGGAGGGA
GATCTCTCCA TGGGTGGGCT GATTGCCGCC TACCTGATCT CCTCGCGCGC GATGGCGCCC
ATCAGCCAGA CCGCCGGGTT GCTGATGCAG TATCACCAGG CCTCGACCGC GCTCGGTTCG
CTGAACGAGA TCATGGCGCT GCCGGTCGAG CGCCCGGCGG ACTCGCACTT CCTGAGTCGT
GATCGCTTCG AGGGCGCGAT CGAGTTTCGC AATGTCGGCT TCGCCTATCC CGAGTCCGCC
ACACCGGCGT TGCAGGGGGT TTCGCTGAAG ATCGAGGCGG GCGAACACGT CGCCGTGCTG
GGTCGCGTGG GCTCGGGCAA GAGCACGCTG GCCAAGCTGA TCATGGGCCT TTATCAGCCG
ACCTCCGGGG CGGTACTGGT GGACGGGATT GACGTACGCC AGCTGGACCC GGCTGAGCTG
AGGCGGTCGC TGGGCTATGT GGGCCAGGAA GTCACGCTGT TCTACGGGAG CCTGCGCGAG
AATCTGGTGG CGGCCGATCC TCTGGCCAGC GACGAGGCGA TCCGCAAGGC GATCGCGATC
TCCGGGATCG AGGACCTGAT TAACACCCAC CCAGAAGGTG TCGATCTGCA GGTCGGGGAG
CGCGGGGGCC GGCTTTCGGG AGGGCAGAAG CAGAGTGTTG GTGTGGCGCG GGCCGTGTTG
CACGAGCCCA GCATGCTGTT GATGGACGAG CCGACAAGCT CCATGGATAA CTCCACCGAG
CAGGGCATGA AGCGCCGTCT GGCGGAATTC ATCCAGGGGC GGACGACCGT GATCGTCACG
CACCGCACCT CGCTGCTAGA GCTGGTGGAC CGGATCATCG TGCTGGATCA GGGCCGTGTG
GTGGCCGACG GGCCGAAGGA GCAGGTGATC CAGGCGCTGC GGGAAGGCCG CGTGGGCAAG
GCGCAGGCAT GA
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| Protein sequence | MGDVDDREPE FPIVDGEGRS DSLLGGLILI ARMHGLRLTP DSALAGLPLD DGRLCPSLVP
RAAQRAGLTT RTVTRDARGL KDDLLPALLL LDQNEAWVLV GWNEDKSVAR VIDPELGDAV
IDVPLKRLKE RYVGRAIYVR PEFRMDARAP RVSKESKGHW FWRVIRENRP LYRDVLIAAV
MINLFALAMP LFVLNVYDRV VPNHATETLF MFAAGVVIVL IADLILRTMR SHFVDKAAMR
ADVKLSSHIM ERVLGLRMEN RPASVGSFAS NIGAFESVRS FISSATIIAF VDLPFAFMFI
AIIALIAWPL AIPVAIGALL LLFYATAIHR KLHGLAEESY RVAAQRNSTL VESLTGAETL
KALGAEGRVQ ATWERATTHL ARTNAQNRLL TASVTHTAMW AQHTVGVAII VLGVFLLMEG
DLSMGGLIAA YLISSRAMAP ISQTAGLLMQ YHQASTALGS LNEIMALPVE RPADSHFLSR
DRFEGAIEFR NVGFAYPESA TPALQGVSLK IEAGEHVAVL GRVGSGKSTL AKLIMGLYQP
TSGAVLVDGI DVRQLDPAEL RRSLGYVGQE VTLFYGSLRE NLVAADPLAS DEAIRKAIAI
SGIEDLINTH PEGVDLQVGE RGGRLSGGQK QSVGVARAVL HEPSMLLMDE PTSSMDNSTE
QGMKRRLAEF IQGRTTVIVT HRTSLLELVD RIIVLDQGRV VADGPKEQVI QALREGRVGK
AQA
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