Gene TK90_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1313 
Symbol 
ID8807079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1393984 
End bp1400592 
Gene Length6609 bp 
Protein Length2202 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003460557 
Protein GI289208491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG TCGTCGTAGC TACCGTCGAA TCCGTTGTCG GCACCGTGAT CGCCCGAGAC 
GAGGACGGCA ACACCCGCGT CCTGCAACCG GGCGACGAGA TCTTCTACGG CGAGGAGGTC
ATCGCCGAGG ATGGCGCCTT CATCGAGATG GCCTTCGAGG ACGGCTCCAC CATGTCCCTG
GCGGGTAACG AGTCCGCCAC CATCACCGAC GACCTGGCGG AATCCGCCGA GCCCGCGCCG
GAAGAAGGCG AGATCGCCGA TGCCACCGTC GAAGAGATCA TCGCCGCCCT GGATCGCGGT
GAAGACATCA CCGACATCAT CGAAGCCCCG GCCGCCGGTG CCGACGGCGG CGCAGCCGGC
GAAGGCGGCG GCTTCGTCCG GATCGCTCGT GGCTCCGAAG AGGTCGGCCA GATCGAGTAC
GCCTATGACC CCAACACCTT GGGCGGCCCC GGCGACGCCG GCAATGGTGG GGGTACGTTC
GCGGACAGCG GCGAAACCAC CGAAGACGTG GTTCCGGAAC CCAGTCTCGT CATCTCCGTT
ACACCGCTCA GTGAGCTGAT TGAACGGATG GGCTCGGATC TTCGTCCCCA GATGCAGGAC
TCGGGGGTCG TCCTGCCCCA ACAGGTCGAC ATGCTGCCGT CTGAACAGCC TGGCACGGGC
ATGGTGGTGT TTAGTCTCGA CAGCACGCTG GACCTCGATG GACTGCCGGA TTCCGCCGCT
GGCCCGATCG AATACGAAAT CGTTGGTGGG GACTCGGACT ATTTGGCAAT TGGCGCGGAT
GCCGATGGGA ATCCGGCCAT CGTCCTGACC GAACAAGGCG CATGGGCGCT TCAGAATGGT
CAGGTTCCTA ACAACGAATT CTCCGTAGAC GTTCAGGGAA CGGTCGAGAT CGAAGGGATC
GGTCCAGTGT CAGCCACTGA GAGCTCAATG GTCGCGGTTG AGGTGCCTGA ACCGACATTT
GAATTTCAGC TATGGCCGGG AGAAGTCTTC CCGATGGCCC CGCAGGGCGA ACTGCCCGGG
AAGGAAGGGG TCGGCCTGCA GGCACTGAGC GAGGAGGTAA ATGCCCCATT CCCCGGGGAC
TTTGGCTTCC CCTCCTCGGA GGTCGAGGCT GGCATGCTGG TATTCGGAAT TAGTCCGCAG
CCGGACTTTG ATGGCATTGA CCCCTCGCTC GGCGAGTTCG TCTACGAGAT CGTCGGTGGT
GACAGCGAAT ACCTCGAACT CTCGCAGAGC GACTGGGGTG ACTGGTCGGT TGTGCTGACT
GAGGCGGGCG CCGAAGCGAT TCAGAACGGG CAGGTTTCCG GTAACGATCT CAATGTCACC
ATCGAGGGGA CGCTGATCAT CGGCGAAGAT CTCGTTAACA CTTTCACGCT AGAAGCCAGT
GCCGAAGGTG GCGTCATGGT GCCGGTGCCG AATCCGGAGC TGACGGTGGA TCTTGCCCTG
GCGGATGGTG CTACCGAGGG GTGGCCGCAG TCGGCGGGCG AGGGTGACGT GGTGTTCGAA
GTCACCACGG ATCTGGACCT GGACGGCATC GACGGCGACC TGGCGGGCGA GATCGAGCTG
AGTCTGACCG AGGACAGCAA CGGTTATCTG GCGCTGGACG GTACCAATGT GGTGCTGACC
GAGGACGGTG CGGCGGCCAT CCGTAATGGC CAGGTCGGAC TGGATGGTCT GATGGCGGCG
GTTGAAGGCA CGGTGACGAT CGCCGAGGAC GGTGTGAACC CGTTCGTGCT GAGCGATGAC
GCGCAAGCCG GTATCGAGGT GCCGATGCCG GAGCCGACTC TGGACGTGAC GGTGACCGCG
GCACTGGATC TGGAGAGCAG TGACCAGGCC TCGGAAGGCC AGCTGGCGTT CACGCTGAGC
AGCGAGACCG ACTACGCCGG GATCGATCCG GAGTTGGGCG GAGAGGTGAG CTACGAGATC
ACCGGTGGCA ACGACGGAGG CTATTTCGAG CTGAACGAGG CGGGCGACGC CATCGTCTTG
ACGGACGTTG GTGCCCAGGC GATCCGCAAT GGCCAGTTCG ACCCGGCGGG TGCCAGTGTG
ATGGTGACCG GCACGCAGGA GATCGGTGAG GGTGAAAACA CCTTCACGGT TACCGGCGTG
GATGATGCAT CGGTGGAAGT GCCGGTGCCG AATCCGGAGC TGACGGTGGA TCTTGCCCTG
GCGGATGGTG CCACCGATGG TTGGCCGCAG TCGGCGGGCG AGGGTGAAGT GGTGTTCGAA
GTCACTGCGG ATCTGGACCT GGACGGCATC GACGGCGACC TGGCGGGCGA GATCGAGCTG
AGTCTGACCG AGGACAGCAA CGGTTATCTG GCGCTGGACG GTACCAATGT GGTGCTGACC
GAGGACGGTG CGGCGGCCAT CCGTAATGGC CAGGTCGGAC TGGATGGTCT GATGGCGGCG
GTTGAAGGCA CGGTGACGAT CGCCGAGGAC GGTGTGAACC CGTTCGTGCT GAGCGATGAC
GCGCAAGCCG GTATCGAGGT GCCGATGCCG GAGCCGACTC TGGACGTGAC GGTGACCGCG
GCACTGGATC TGGAGAGCAG TGACCAGGCC TCGGAAGGCC AGCTGGCATT CACGCTGAAC
AGCGAGACCG ACTACGCCGG GATCGATCCG GAGTTGGGCG GAGAGGTGAG CTACGAGATC
ACCGGTGGCA ACGACGGAGG CTATTTCGAG CTGAACGAGG CGGGCGACGC CATCGTCTTG
ACGGACGTTG GTGCCCAGGC GATCCGCAAT GGCCAGTTCG ACCCGGCGGG TGCCAGTGTG
ATGGTGACCG GCACGCAGGA GATCGGTGAG GGTGAAAACA CCTTCACGGT TACCGGCGTG
GATGATGCAT CGGTGGAAGT GCCGGTGCCG AATCCGGAGC TGACGGTGGA TCTTGCCCTG
GCGGATGGTG CCACCGATGG TTGGCCGCAG TCGGCGGGCG AGGGTGAAGT GGTGTTCGAA
GTCACTGCGG ATCTGGACCT GGACGGCATC GACGGCGACC TGGCGGGCGA GATCGAGCTG
AGTCTGACCG AGGACAGCAA CGGTTATCTG GCGCTGGACG GTACCAATGT GGTGCTGACC
GAGGACGGTG CGGCGGCCAT CCGCGACGGC CAGGTCTCGG GCAACGAGCT CGCGGCGACT
GTTGAAGGCT CGGTGACCAT CGCCGAGGAC GGGGTAAATC CGTTCGAGCT GAGTGACCAT
GCGTCGGCAG TCACTGGGGT TCCGGTCCCT GGGCCGGAAA TCACGGGCTT GGGCGAGAAG
GATTTCTTCT TCGACGAGAA GCATCTGGAG AACGGCACAA GTCCAGATCC CGCCCAGTTG
GTGAAGTCAG GCAGCTTCGC ACTCAATGCG CCGGCGGGTA TCGCCAGCTT GGCAATCGCA
GGAACCTTGA GCGGGAGCAA CGCTGCCGGG GCCACAGATG AAAATGGCTC TGTGCTCCTG
ACACTCGATC AACTCGAAGC GCTTGATGAC TCCAACACGG TCGATATCGA AACCGACAAT
GGCAATTTGC TGATCCTTAA TGGTTTTGAC AGCGACACCG GGGAGGTCAG TTTCGATCTG
GAGTTCCGTG AACCGATCGA GCATCCCGAT GGCCAGGGGC GCAACCTGGA CTGGAAGGAC
TCGATTGCGG TCACGCTGAC CGACGATAAC GGCCAGGTTG CTGATGACAC CATCGACGTG
TTGATCCGCG ACGATGCGCC GGTATTCAAG GACGGTGAAG GAATCACCCT TACCGGTGAA
ATAACCGAAA GCCCAATAGA AGGCAACAAC GGCCTCAACA TCGGTGCGGA CGAGGATGGA
GCATTCATTC AGGACATCGA ACTATCCGTT GATGACGACG GGTATCTCGT GGCGCTGCTC
GATGGGGATG AAGTCCTTCT GACCTCCCGA GGCGATAAGC TAACGTTCAG TTTCGATGCC
GATACGGCGA CACTGACCGC TAACAATTCA AATGGAGACC CGGTCTTCAC GATTCAGGCG
GATATTGATG GTAGCTACAT CGTCAATGTG CTGGAACCGC TCGACCCGGT GGCGCGGGGC
AGCTTCGACG AGGAAAGCCT GACCTCTGGT GGCGGGATCG ATGATGACCT GTTTGTGTTC
GATAACGGTC TGGAGGTCCA GTTCTCATCA GAAAATGGTG CAGTCAATTG GTCTGGAAGT
GGTATTGGCG TCGCAAATAA CCTGATCAAT GGCGGGCAAA CCCTGTCTGC GAGCTTTAAT
CAGTACGTCA CGGATCTGGA TTTCACGATG GGGAACCAGG GTTCGCCGAG CTGGGAAATC
TACCGCGATG GTGACCTTGT AGGGTCCGGT GACAGTCTGT CGATCAGTGA ACCAGGTGGA
TTTGACGAGA TCCGTTTCCT GGGTTCCTCG GGGCAGGGGA GCCATTACAA CATCAAGGGT
ATGTCCGGGA CTTACATGGA TGCGTCGGAA AGCTTCGAGC TTCCGGTGAC CTTCCATGCG
GAAGATGGTG ATGGTGATGC CGCCAGCTAT GAGATTCCGA TCATCTTTGA TCCTGCGCTG
GTCGATTTGC CTGAGGTCGA GACCCTGTTG ATTCCGACGG TTTCGGTTTC GGTCGATTCC
GAGGAGGGCC AAGAGACTGT CCTCAAGGAT GGTTTCGCGG ACCTGGGTGT CGGCGGTTCC
GGTGATGGGA ATATTAACGA TCCCAATCCG CCGGCGGATA CCGAGACACT GATGTTCGAC
TTTGGGCAGG CCAATGCCGG GCAAACCTTC AACCTCAGCT GGACGCAGCA AGCGAAAGGT
GGCTGGGAAG ATGGAAACCC GGATGGGCTT CCGTCTTGGG AGAATCGTGG CGGTACGCGG
GACACCTTTA AGGTCTTTGT GAACGGCGAG GAGCTCTACG AGACCTCGTG GTACGACCCG
GCCAATTCGG ATAGCACCGT GTTCCCTGCC GAGGACGAGT CGCTGACGGT GACGCTGGAT
GAAAACGGTC AAGCGGAGGT TGTGTTCGAG GTGCGTTCTA CGCATCCGGA CGAAGTCGTC
GATGTCAGCA ACATCCAGGG GCAGCTGGAT GTCACGTCCA CTATCTACAC GGTTTCGCTC
GACGGCAGCA TCGATGACCC GGGCGAGATC GACTACTACC AGCTGGAGGT ACAGGGCGGC
GAACTCCTGG TGAACGGCAA CGTACAGTCA GCGGTCGATG GCCTTTATAC GGTGAACCCG
GCCGATATCG ATGGATTGAC GGTACGTCCC GATGCTGGAT CCGATGAGAT CGAGGTGTCG
GCGCAAGCAG TTTCCACGGA TGGCGTATGG AGCGACGTGG ATGTCGACAG CACGGAGGTC
GTTTACGCCA GTGCAGTGAG CGCGGTCGAT AATCTGAATA CGGCCTATGT CGGCGAGTCG
TTGGAAGAAC ACCTGAGCGG TCGTGAGAAA GCGACGGATT GGACAGAGAC TCGCGAGTTC
ACGATAAGTG AGGGCTATAC GGGTTCGGTC TCTATGGCTG CGGAGTTCAG CCTTTGGGCA
GGGATCATTT CTCAGGGCGA AGCCGAATTC ACGTGGGCGC TCTACCAAGA CGACATTGTT
GAAGGTGAAC AACTTCTTGC GAGTGATGTT ATCACGCGAA AGGCTTCAGA TGGTTCCGAC
TTGAACGTGC CGCTGGACCT ACCCGAGGAC CTGAGTTCGG GGTCTTACCG ACTGGAACTG
GTTGGGGAGC AAACCAACGG CTGGAGCTTT GGTCCCATCT CTTGGGGCGG GGAGGTCGGA
TTCTCGGAGA TTGTGGTAGA CCAGCAGGCG TCTAACACGG TTACTGGGAA TGTGATTACG
GATGAGGATG CCGAAGGCAA TTCCGATGAG CCAGGAAGCG ATTCGACGAC CCTGAGCGTC
TTCGATGGCG ATGGATTCGT CGAAGTCGAA GGCGAACATA CGGTGGCCGG GGAGTTTGGT
TCACTGACCC TCGCGGAGGA CGGGACGTAT ACCTATACGG CATCCAATGA TGTTGCCAAC
GCCGGGAACA TCGAGACCTT CGATTACAAG CTGACGCATC CGAACGGTGA CGAAGCGGTT
GCGACCCTTT CGATCCGTAT CGACAGCCCG GATGTGGAGG TGATCTGGGG TGACGATCTC
GAGCCGGGCG CAACCATTGC GGGTACGGAG GTAGACGAGA TCCTGGTGGG CACCTCGGGT
GCGGATCAGA TCGCGGCTGG TGCCGGCAAT GACATCCTGA TCGGTGGTGA CGGTGCCGAT
ACGTTTATCT GGCCCGGTGA TGTGGCCGGG GACGTCCCGT CGACCGGCCC AGGGAACTCC
GGAGACGACT TTGATCCCGA CGAAATGCCG CAGGATGTGG TGCGAGATTT CACGGTCGAT
TGGGAACAAG GTTTTACTGG CGAAGGGGAT GCTGACCGGC TGGACCTTTC GGACCTGCTG
GTCGGAGCGG ACTCCGACAA TGTCGATGAG TTCATCCTCG CGGTAGAGGA TGGCGAAGGC
AACACGGTTC TGTATGTACG AACGGAGGGC GACACGTCGC CGGGCAATAG TGGTAACGCG
AATAACGGCA ATGGTGAATG GGCGCACAAT CAGTCCATCG TGTTGGAGGG CGTTAGCATG
GACGGCAGGG ATTCGGCTGA ATTCGTCAAG CAATTGTTGG ATAACGACCA GCTGAAGATC
GACCAGTAA
 
Protein sequence
MSEVVVATVE SVVGTVIARD EDGNTRVLQP GDEIFYGEEV IAEDGAFIEM AFEDGSTMSL 
AGNESATITD DLAESAEPAP EEGEIADATV EEIIAALDRG EDITDIIEAP AAGADGGAAG
EGGGFVRIAR GSEEVGQIEY AYDPNTLGGP GDAGNGGGTF ADSGETTEDV VPEPSLVISV
TPLSELIERM GSDLRPQMQD SGVVLPQQVD MLPSEQPGTG MVVFSLDSTL DLDGLPDSAA
GPIEYEIVGG DSDYLAIGAD ADGNPAIVLT EQGAWALQNG QVPNNEFSVD VQGTVEIEGI
GPVSATESSM VAVEVPEPTF EFQLWPGEVF PMAPQGELPG KEGVGLQALS EEVNAPFPGD
FGFPSSEVEA GMLVFGISPQ PDFDGIDPSL GEFVYEIVGG DSEYLELSQS DWGDWSVVLT
EAGAEAIQNG QVSGNDLNVT IEGTLIIGED LVNTFTLEAS AEGGVMVPVP NPELTVDLAL
ADGATEGWPQ SAGEGDVVFE VTTDLDLDGI DGDLAGEIEL SLTEDSNGYL ALDGTNVVLT
EDGAAAIRNG QVGLDGLMAA VEGTVTIAED GVNPFVLSDD AQAGIEVPMP EPTLDVTVTA
ALDLESSDQA SEGQLAFTLS SETDYAGIDP ELGGEVSYEI TGGNDGGYFE LNEAGDAIVL
TDVGAQAIRN GQFDPAGASV MVTGTQEIGE GENTFTVTGV DDASVEVPVP NPELTVDLAL
ADGATDGWPQ SAGEGEVVFE VTADLDLDGI DGDLAGEIEL SLTEDSNGYL ALDGTNVVLT
EDGAAAIRNG QVGLDGLMAA VEGTVTIAED GVNPFVLSDD AQAGIEVPMP EPTLDVTVTA
ALDLESSDQA SEGQLAFTLN SETDYAGIDP ELGGEVSYEI TGGNDGGYFE LNEAGDAIVL
TDVGAQAIRN GQFDPAGASV MVTGTQEIGE GENTFTVTGV DDASVEVPVP NPELTVDLAL
ADGATDGWPQ SAGEGEVVFE VTADLDLDGI DGDLAGEIEL SLTEDSNGYL ALDGTNVVLT
EDGAAAIRDG QVSGNELAAT VEGSVTIAED GVNPFELSDH ASAVTGVPVP GPEITGLGEK
DFFFDEKHLE NGTSPDPAQL VKSGSFALNA PAGIASLAIA GTLSGSNAAG ATDENGSVLL
TLDQLEALDD SNTVDIETDN GNLLILNGFD SDTGEVSFDL EFREPIEHPD GQGRNLDWKD
SIAVTLTDDN GQVADDTIDV LIRDDAPVFK DGEGITLTGE ITESPIEGNN GLNIGADEDG
AFIQDIELSV DDDGYLVALL DGDEVLLTSR GDKLTFSFDA DTATLTANNS NGDPVFTIQA
DIDGSYIVNV LEPLDPVARG SFDEESLTSG GGIDDDLFVF DNGLEVQFSS ENGAVNWSGS
GIGVANNLIN GGQTLSASFN QYVTDLDFTM GNQGSPSWEI YRDGDLVGSG DSLSISEPGG
FDEIRFLGSS GQGSHYNIKG MSGTYMDASE SFELPVTFHA EDGDGDAASY EIPIIFDPAL
VDLPEVETLL IPTVSVSVDS EEGQETVLKD GFADLGVGGS GDGNINDPNP PADTETLMFD
FGQANAGQTF NLSWTQQAKG GWEDGNPDGL PSWENRGGTR DTFKVFVNGE ELYETSWYDP
ANSDSTVFPA EDESLTVTLD ENGQAEVVFE VRSTHPDEVV DVSNIQGQLD VTSTIYTVSL
DGSIDDPGEI DYYQLEVQGG ELLVNGNVQS AVDGLYTVNP ADIDGLTVRP DAGSDEIEVS
AQAVSTDGVW SDVDVDSTEV VYASAVSAVD NLNTAYVGES LEEHLSGREK ATDWTETREF
TISEGYTGSV SMAAEFSLWA GIISQGEAEF TWALYQDDIV EGEQLLASDV ITRKASDGSD
LNVPLDLPED LSSGSYRLEL VGEQTNGWSF GPISWGGEVG FSEIVVDQQA SNTVTGNVIT
DEDAEGNSDE PGSDSTTLSV FDGDGFVEVE GEHTVAGEFG SLTLAEDGTY TYTASNDVAN
AGNIETFDYK LTHPNGDEAV ATLSIRIDSP DVEVIWGDDL EPGATIAGTE VDEILVGTSG
ADQIAAGAGN DILIGGDGAD TFIWPGDVAG DVPSTGPGNS GDDFDPDEMP QDVVRDFTVD
WEQGFTGEGD ADRLDLSDLL VGADSDNVDE FILAVEDGEG NTVLYVRTEG DTSPGNSGNA
NNGNGEWAHN QSIVLEGVSM DGRDSAEFVK QLLDNDQLKI DQ