| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1311 |
|---|
| Symbol | |
|---|
| ID | 8807077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1391548 |
|---|
| End bp | 1393404 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003460555 |
|---|
| Protein GI | 289208489 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0843987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGA ATACGGTAGT GGCCACCGTC CAGGCATTGA CCGGGACTGT GATTGCGAGA
GATGTCGACG GCAATTCCAG GGTGCTCGCC GTCGGCGATC CCGTGTATGC GGGGGAAGAG
GTGATCCCAC TGCAGGGGGC GTCGGTTGAT CTGCAGGCGA TGGAAGGTGG TGTCTTGTCG
CTCGGTGAGG GTCAGCAGGT CCTGGTGGGC GAAGCTCTGG CGGATAGCGG CCGTGCGGAC
AATCCAGAGA TTCCGACGGC GGAAGAAGTG ATTGCGGCCC TGGAGCGTGG TGAGTCACTG
GATGCGCTGA TTGCGCCACC GGCGGCCGGT CTCGAAGGTG GTGATAGCGA TGGCGGCGGT
TTCGTGCGTG TCGCACGCAT TAACGAGCCA GTAGAGCCGA TTAACTACAC TTTTCCGGAA
AACGTCTTCG GTCGTCCCGA TGCTCTGGGC GAGACCGTCG CGGTGCCGGG AGGAGAAACG
GCGGACACGG TTGTGCCTCC CGGGCAGCCA CCAGTAGAAC CACCGGTTGA GCCGCCCCCT
CCGGTGACCG CCAACCCGAC GCTAACGGTG TCGGTATCCG TGGCGGCCGG ATACGGCTAT
GACGACGCGA ACGATGCGGC TGCGGGCGAT GTGGTCTTCG AGGTTTCCCA TACCCTGAAT
CTGGATGGGC TGGACCCCGC TCTAGCCAGC GCAATCGTCT ACAGCATTGT CGGCGGCGAT
ACGGCGTATC TTGCGCTCGC TCAGGATGGG GCGGGCAACT GGGTGGTGGT GCTGACCGAG
GCCGGGGCGG CCGCAATCCG GGCAGGTGTG GTGGACGGTA ACCAGTTGAA CGTGATCGTG
GAGGGGACGA TTGAACTGGT GGACCTTCCC GATCTGGTGG ATACCGACAA CGCTTTTGCG
CCGGTTCCCG AGCCGGGGAT TGTCGAGCCC CCAGTTGAGG CGGATCTTTT CGCCTCAGCG
CACGTGGTCG GGGCCAGTCC CGCCATCGGA ACGATGGCAA ACGTTCATGG CTTGAAGGAC
ACAGGCGCCC AAAGTGCGGC CGTGTCTTAC GGAGAGGGGT TTTTCGCCGT AGATCACCAA
GGCAACAATA ATCCCAGTGC GATTGACTTT ATCGAAGCCC TGCTCTTCGA GTTTCGAGAA
CCGACCGACA CCGCGGTGTT CCAGATTGAA GGTGCAATCA ATGGCGGCTC GTATCACCTT
TACGATGCCG ATGGAGTGCG CATCGGCGAG GCTCGTGATC TTGCCGCGGA TGTGAACGAA
GACGGTTTCC TGGAGCTGAG CGGCGAGACG TTTTCCTATA TTGCATTTCA GGGCGGCAGT
ACAGGTTCGG GAGGGAGCGG GGATCGAAGC GAGTTCTCGG TTCGACCGGT GGATTTGTCG
GTCCAGGTTG GCGAGGGCGA TGATGCCGAT TTCTATCCTG CCGGAGGCGA TGAAGCCCTG
GTTGCCGATT CGGTGGAGAC GCTCGAAGAG GCCGATGACT TTGGCGCGAA CTTCCTGACG
GTGGACTCGG ATCAGGACAT TTTCGTGGTT GCGGAAGGCG GGCAGGGCAC GACGGACGAC
CCCGCTCGGT TCGTGATACA GGGGTTTAGT CTGGAAAGCG ACAACGGCGC CGCCCAGATT
ACGCTCGGCG AGCTCCTGTC GAGCGCGAGC CAGGAGACCA TCGACCAGTA CCTGATGGCC
GAGTCGCAGG GAGAAGATAC GGTGCTGCAC ATCAGTTCCG GGGGCATGCT CGGGACGGAT
ACGGGCGGGG CCGATTACGC GATTACGCTG GAAGGGGTCA GCATGGACGG TTTCGACTCG
TCCTATGATT TCATTCAGAC GCTGATCGAG AACGGCCACC TGACAATCGA TCAGTAA
|
|---|
| Protein sequence | MAVNTVVATV QALTGTVIAR DVDGNSRVLA VGDPVYAGEE VIPLQGASVD LQAMEGGVLS
LGEGQQVLVG EALADSGRAD NPEIPTAEEV IAALERGESL DALIAPPAAG LEGGDSDGGG
FVRVARINEP VEPINYTFPE NVFGRPDALG ETVAVPGGET ADTVVPPGQP PVEPPVEPPP
PVTANPTLTV SVSVAAGYGY DDANDAAAGD VVFEVSHTLN LDGLDPALAS AIVYSIVGGD
TAYLALAQDG AGNWVVVLTE AGAAAIRAGV VDGNQLNVIV EGTIELVDLP DLVDTDNAFA
PVPEPGIVEP PVEADLFASA HVVGASPAIG TMANVHGLKD TGAQSAAVSY GEGFFAVDHQ
GNNNPSAIDF IEALLFEFRE PTDTAVFQIE GAINGGSYHL YDADGVRIGE ARDLAADVNE
DGFLELSGET FSYIAFQGGS TGSGGSGDRS EFSVRPVDLS VQVGEGDDAD FYPAGGDEAL
VADSVETLEE ADDFGANFLT VDSDQDIFVV AEGGQGTTDD PARFVIQGFS LESDNGAAQI
TLGELLSSAS QETIDQYLMA ESQGEDTVLH ISSGGMLGTD TGGADYAITL EGVSMDGFDS
SYDFIQTLIE NGHLTIDQ
|
|---|
| |