Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1309 |
Symbol | |
ID | 8807075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1387740 |
End bp | 1389647 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase with extracellular sensor |
Protein accession | YP_003460553 |
Protein GI | 289208487 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.939066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGA GAAAACAACT CTGGATTGCG GTGGCCATCA TCATGCTGCT GGCCTTGCTG GTAAGCATTG TGGTCAGCAC CCTGTCGGCG CGCGACTATC TGGCGCAGCA ACTGCTGACC AAGAACATCG ACAACGCCGC TTCGCTGGCC CTGTCCCTCT CGCAGCTGCC CAAGGACGAC ACGACTGTGG AGCTGCAGAT CGCCTCGCAG TTTGACACCG GGCATTACCG TCATATCCGC CTGGTGGATC CTGGCGGCGA GCTGATGATC GAACGGCGCA ACCCCGAACC ACCGCAAGGC GTCCCCGACT GGTTCGTCGA GCTTCTGGCG TTCAATGTGC GCCCCGGCAT CGCCCATGTC TCGGACGGCT GGTCGTCGTT CGGCACACTG ATCGTCGAGA GCCAGACCAA CTACGCCTAC GAGTCCCTGT GGGAAGGCAC CCTGCGCCTC ACCGCCATTT TTGCCGGAGG CCTTCTGCTC ATCGGCCTGC TTGGATCCTT CCTGCTCGGA CGTCTTATCC GTCCGCTCCG TCAGGTCGTG GATCAGGCCG AGGCAGTGGG CGAACGGCGG TTCGTGACGA CACCGGAACC GCGCACCTGG GAGTTTCGCG CGCTGGTACG AGCCATGAAC CGGCTGACCG AACATGTCCG GATGATGCTG CAGGAAGAAT CCTCTCGGCT GGAACGCCTC AAGAACCGCC TGCAACATGA TGATGTTACG GGCCTTTTGA ATCGAGAATC TTTTCTTGCA CGGTTTCAGG CCACCCTCGA GAACCGCCAT TCCGGCTCCG CCGGGAGCTT TGTCGTGCTG CGTGTTTCGA GCCTTCCCGA ACTCAATCAG GCCATCGGAC ACGACAAACT CGATGCGCTT CTGGCGCGGA TTGCAGGTGT CGCCGAGCAG CAGGTCAGCG TAACGGACTA CGGTGCGGCC GGACGCCTGA AAGGGTCGGA TGTCGCGGTC TTCGGCGACG GCATTGGCGA CAGTCGTCGC TTTGCCGAAT CCTTGCTGAC CGCGATTCGT GCCGAACTGG GACCCGCGGC CCCGGACATG ATGGCCCTGC ATCTGGCGGG CACGCCCTAC CACCCCGACG ACAGCACCGG CGAGGTCCTC AGTCGCGTCG ATCAGGCGCT GGCTCGTGCG GAGCTGGAAC CGGGCGATTC CATTGCCGAG GAGCCACACG CGGTCCTGCC GCACGCCAAC CAGAACGAGT GGCGGACCGC GATTACCGTG GCCCTGGCTA CCCATGGCGT GCAGCTTGCG CGTTTCCCCG TGATCGACGC CGACCACGAA CTGATGCACC ACGAGGCCCC GATGCGCCTG CTGCTCGATG GGGAATCCCG GCCGGCGGGA TACTTCATGC CCTGGGCCGT GCGTCTGGAC CTGATACGGC AACTGGACGA TGCCGTGCTG GAAACGGCAC TGGAACAACT TCGAAGCTCC AGCGAACGGC TCGCGATCAA CCTGTCGGTC GACAGCCTGC AGGACACCGG CTTTCGCCAG CGTCTGGAAT CCCGCCTGGC CTCCGACCCG GAAGTGGCCG GTCGCCTGTG GCTGGAATTC CCGGCCCGAG GCGCCCTGGC CCATCCCGCC GAACTGCGCG ACCTGTGCCG TATCGCGCGT GTCACGGGAT TTGTGGTCGG TCTGGAGCAC GCGGGGCCGG AGGCCTTCCG CTCACACGAC CTTACCGCGT ACGGGCTGCA TTACGTGAAG CTGCAGGCCT CGCTGATCCA GGGTGTCCAT CGATCCACGG AGACCCAGGC GCTGATTCGC GGGCTTTGCA CCCTGGCGCA CTCGATTGGC ATTCTGGTGG TCGCCGAAGG CTGCGACAGC ACCGACGATA TCGAGCCCCT GATGGAGCTT GGAATCGACG GCGTGACCGG CCGAGCCGTT CAGTCCCTCA AGGCTTGA
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Protein sequence | MTLRKQLWIA VAIIMLLALL VSIVVSTLSA RDYLAQQLLT KNIDNAASLA LSLSQLPKDD TTVELQIASQ FDTGHYRHIR LVDPGGELMI ERRNPEPPQG VPDWFVELLA FNVRPGIAHV SDGWSSFGTL IVESQTNYAY ESLWEGTLRL TAIFAGGLLL IGLLGSFLLG RLIRPLRQVV DQAEAVGERR FVTTPEPRTW EFRALVRAMN RLTEHVRMML QEESSRLERL KNRLQHDDVT GLLNRESFLA RFQATLENRH SGSAGSFVVL RVSSLPELNQ AIGHDKLDAL LARIAGVAEQ QVSVTDYGAA GRLKGSDVAV FGDGIGDSRR FAESLLTAIR AELGPAAPDM MALHLAGTPY HPDDSTGEVL SRVDQALARA ELEPGDSIAE EPHAVLPHAN QNEWRTAITV ALATHGVQLA RFPVIDADHE LMHHEAPMRL LLDGESRPAG YFMPWAVRLD LIRQLDDAVL ETALEQLRSS SERLAINLSV DSLQDTGFRQ RLESRLASDP EVAGRLWLEF PARGALAHPA ELRDLCRIAR VTGFVVGLEH AGPEAFRSHD LTAYGLHYVK LQASLIQGVH RSTETQALIR GLCTLAHSIG ILVVAEGCDS TDDIEPLMEL GIDGVTGRAV QSLKA
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