| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1307 |
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| Symbol | |
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| ID | 8807073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 1385254 |
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| End bp | 1386708 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_003460551 |
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| Protein GI | 289208485 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACG GAATTAGGCC TGTGGCTGGC AAAGGTGGTT TGCTGGCCCT GACGGTGGCC
GTGGCGATGG TAGTGGGCGG ATCGGCGCAG GCCGAGGCAC CGGAACCCCT GCGTGACGCC
GCGATGGAAG CGGTACTTTC CAACCCTGAC GTACAGTCGC GGTGGCATGC CTTTCGCGCC
TCGGGGGAAG AACAAACCGG CGCGCGTGGG CGTTTCTTGC CCGAGATCGA TTTGAACGCC
CGTGCCGGGT ATCAGCGCCA GCGCTCCAGC GACGACAATT TTGATTCGTT CTCGCGTAAC
CCGCGGGGCG TCGACATCAC GCTGACGCAG ATGCTCTACG ACGGCTTCGA GACCGCGAGC
GAAGTGAGCC GCCTGGGTGA GATTCAGCGG GTGCGTTTCT TCGAGCTGCG CGAGACGACC
GAAGAGATCG CACTGGAAGC CGTACGCGCC TTCGCCGATG TCCAGCGCCA GCGCGCCCTG
GTGGACTTGG CGCAGGAGAA CTACGACGCG CACAAGGAGG TTTACGACCA GATCGTGGAC
CAGACCGACC GTGGCGTGGG CCGCGGGGTC GATCTCGAGC AAGCCTCGGG GCGTCTGGCG
CTGGCCGAGT CGAACCTGCT GACCGAGCGC CAGAACTTGC ACGACGTGAA CGCGCGGTAC
TACCGCATCG TGGGGCAGAT GCCCGCCGAC GGCCGGGTAG ACCTGATTGG CACCTTCTCG
GACGAGCCGA TTCCCGGCAC GGTTCAGGAA GCCCTGACCG AGGCCATCAC CAAGAACCCG
GCCATGTTCG CCTCGCTGCG CAACATGGAA GCGGCGCAGG AACAGCGCAA CGTGGCCCGT
TCGGCCTTCC ATCCGCGTCT GGACCTGCAG CTGCGTCATG CCTACGAGAA CGACATTCTC
GAACGCGAGG ACATCCGTAT CCATGACACC TCGGCGCTGG TGGTGATGAC CTGGAACCTG
TTCCGCGGCG GCACCGACCA GGCGCGGGTA CGTCAGTTCA CCGAAGAGTT CAACCAGGCG
CGCGATCAGC AGGAGTCGGT CTGCCGCAAT GTGCGTCAGA CCGTCTCGGT GGCGTACAAC
GACATGCGTT CGCTGGACAG TCAGCTGCGC TTCCTGCGCC AGCACCGTGA TTCGTCCGAC
CGTGTGCGTA CTGCGTATCG CCAGCAGTTC GGGATCGGCC AGCGCAGCCT GCTGGACCTG
CTCGACACCG AGAACGAGCA CTTCGAGGCA AGCCGCGCTT ACATCAACGC CCAGCACGAT
ATGGAGATTG CCAAGGCGCG GGCGCTGAAT GGCATGGGCC GACTGCTCGA ATATCTCGAT
ATCTCGCGTG GCGACATGCC AACCGCCGCC GAGCTGGGGC TGGTGGATGA TGCCGCCCGG
ATCGATCCGG AGTCGGTATG CCCGGCGGAT GCCCCGCAGA TGAGCGAAGC GCGCCACGAA
AGCATCTTCC GCTAA
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| Protein sequence | MMNGIRPVAG KGGLLALTVA VAMVVGGSAQ AEAPEPLRDA AMEAVLSNPD VQSRWHAFRA
SGEEQTGARG RFLPEIDLNA RAGYQRQRSS DDNFDSFSRN PRGVDITLTQ MLYDGFETAS
EVSRLGEIQR VRFFELRETT EEIALEAVRA FADVQRQRAL VDLAQENYDA HKEVYDQIVD
QTDRGVGRGV DLEQASGRLA LAESNLLTER QNLHDVNARY YRIVGQMPAD GRVDLIGTFS
DEPIPGTVQE ALTEAITKNP AMFASLRNME AAQEQRNVAR SAFHPRLDLQ LRHAYENDIL
EREDIRIHDT SALVVMTWNL FRGGTDQARV RQFTEEFNQA RDQQESVCRN VRQTVSVAYN
DMRSLDSQLR FLRQHRDSSD RVRTAYRQQF GIGQRSLLDL LDTENEHFEA SRAYINAQHD
MEIAKARALN GMGRLLEYLD ISRGDMPTAA ELGLVDDAAR IDPESVCPAD APQMSEARHE
SIFR
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