Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1303 |
Symbol | |
ID | 8807067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1380374 |
End bp | 1382242 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | protein-export membrane protein SecD |
Protein accession | YP_003460547 |
Protein GI | 289208481 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAATT CCTATCCGGC GTGGCTGTAC GCCCTGATTG TCGTCGTCAT CCTGGGTGCG GGGCTGTATG CCGCGCCCAA CCTGTTCCCG GAGGACCCGT CGGTCCAGAT CGGGAATCCG ACCACCGGCG AGATTGATCA GAACATCCGT GAGCTGATGG GCACCATCCT GGGTGCCCAG GGCGTCACGC CGCATACGGT CGAGGAGCAG GACGACGGCC AGATCCTGCT GCGCTTCGAG ACCACGGACG AGCAGTCCAC CGCGGCGGAG ATATTGCGCA ACGCGCTGGA TGATAATCAC ACCGTAGCCC TGAACATGGC CCCGGCCACC CCGCGGTGGT TGCGAGCCAT CAATGGCCAG CCCATGGCCC TCGGCCTCGA CCTGCGTGGG GGGGTTCACT TTCTGATGGA AGTGGACCTG GACGCCGTGA TTGGCACCGC GATGGAACGC TACTCGAATG AGTTGCGCGG GCGCCTGCGT GAAGAACGTA TTTCGTTCGA CACCGTGGAA CGCGGCTCCC GCGATCTGAC CGTGATGTTC GAGAGCGAGG CGGATCGCGA AGCGGCCGAG GGCTGGCTGC AGCGCCAGTA TCGCGAGGAA CTGGTCTGGG AATCGCGTGG GTCCGGTGAC ACCAGCCGAC TGGTAGCCAC ACTGGATGAC GACCATCTGA CTGAACTGCG CCGTCAGGCG CTGCAGCAAA ACATCTCCAC GCTGCGCTCT CGGGTCGACG AGCTGGGCGT GGCGGAGCCG ATCATCGCCC AGCAGGGCGA GAACCGGATC GTAGTGCAGC TCCCGGGCGT GCAGGACACG GCACGGGCGA AGGAGGTCCT GGGCGCGACC GCGACGCTGG AATTCCGCCT CGTGTCCGAG AGTGGCGATG CTCAGGAGGC CGACGAAACC GGGCGTGCAC CCTCGGGTAC ACGGCTTTAT TACGAACGCG ACGGGACACC GGTGCTGCTG CAGCGCCAGG TCATGCTGAC GGGGGACTAC ATCACGGATG CCTCCTCGGG CATTGCCCAG GATACGGGCG GTCCGGCGGT GTTCATCAAT CTGGACGGCC AGGGCGCGCG GATCTTCTCG CGCGTGACGT CGGACAACGT CGGCCGGCTG ATGGCGACCG TGTTCATCGA GACCTCGACC GAGACGGTAG AGGAAGACGG CGAGCAGGTG ATGCGTACCT CCCGTAGCGA AGAGGTCATC AACGTCGCGC GCATCAACGA GCCCCTGGGG CGTCGCTTCC AGATCTCCGG CCTCGACAGC AGCCGCGAGG CTCGCAATCT GGCGCTGCTG CTGCGCGCCG GCGCGCTCGC CGCACCGATG TCGATCGTGG AAGAACGTAC GGTGGGCCCG AGCCTGGGTC AGGAAAACAT CGATCGCGGT ATGCAGTCGG TGGTCATCGG CTTCATTGCC GTGATGATCT TCATGGTGTT GTACTACCGG GTGTTCGGAG TCATCGCGAA CGTTGCGCTT GCGTTGAATC TGATCTTCAT TGTCTCGGTG TTGTCGATGC TGCAGGCGAC ACTCACCTTG CCGGGCATCG CGGGTATCGT GCTGACCGTG GGTATGGCGG TGGACGCCAA CGTTCTGATT TTAGAGCGAA TACGCGAGGA GTTACGGAAC GGACTGTCAC CACAGGCCGC GATCGCCTCG GGCTATGACC GCGCGTTCAC TACGATTGCG GATGCCAACG TGACCACGCT GATCGCGGCG CTCGTACTGT TCCTGTTCGG CACCGGCCCG ATCAAGGGAT TCGCGATCAC GCTGTCGATC GGGATCATCG CCTCGATGTT CACGGCGATC ATGGTGACCC GCGCCATCGT CAACCTCACC TACGGGCGGC AGCGTCGGCT GAACCGTCTG GCTATCTGA
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Protein sequence | MRNSYPAWLY ALIVVVILGA GLYAAPNLFP EDPSVQIGNP TTGEIDQNIR ELMGTILGAQ GVTPHTVEEQ DDGQILLRFE TTDEQSTAAE ILRNALDDNH TVALNMAPAT PRWLRAINGQ PMALGLDLRG GVHFLMEVDL DAVIGTAMER YSNELRGRLR EERISFDTVE RGSRDLTVMF ESEADREAAE GWLQRQYREE LVWESRGSGD TSRLVATLDD DHLTELRRQA LQQNISTLRS RVDELGVAEP IIAQQGENRI VVQLPGVQDT ARAKEVLGAT ATLEFRLVSE SGDAQEADET GRAPSGTRLY YERDGTPVLL QRQVMLTGDY ITDASSGIAQ DTGGPAVFIN LDGQGARIFS RVTSDNVGRL MATVFIETST ETVEEDGEQV MRTSRSEEVI NVARINEPLG RRFQISGLDS SREARNLALL LRAGALAAPM SIVEERTVGP SLGQENIDRG MQSVVIGFIA VMIFMVLYYR VFGVIANVAL ALNLIFIVSV LSMLQATLTL PGIAGIVLTV GMAVDANVLI LERIREELRN GLSPQAAIAS GYDRAFTTIA DANVTTLIAA LVLFLFGTGP IKGFAITLSI GIIASMFTAI MVTRAIVNLT YGRQRRLNRL AI
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