Gene TK90_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1303 
Symbol 
ID8807067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1380374 
End bp1382242 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content64% 
IMG OID 
Productprotein-export membrane protein SecD 
Protein accessionYP_003460547 
Protein GI289208481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATT CCTATCCGGC GTGGCTGTAC GCCCTGATTG TCGTCGTCAT CCTGGGTGCG 
GGGCTGTATG CCGCGCCCAA CCTGTTCCCG GAGGACCCGT CGGTCCAGAT CGGGAATCCG
ACCACCGGCG AGATTGATCA GAACATCCGT GAGCTGATGG GCACCATCCT GGGTGCCCAG
GGCGTCACGC CGCATACGGT CGAGGAGCAG GACGACGGCC AGATCCTGCT GCGCTTCGAG
ACCACGGACG AGCAGTCCAC CGCGGCGGAG ATATTGCGCA ACGCGCTGGA TGATAATCAC
ACCGTAGCCC TGAACATGGC CCCGGCCACC CCGCGGTGGT TGCGAGCCAT CAATGGCCAG
CCCATGGCCC TCGGCCTCGA CCTGCGTGGG GGGGTTCACT TTCTGATGGA AGTGGACCTG
GACGCCGTGA TTGGCACCGC GATGGAACGC TACTCGAATG AGTTGCGCGG GCGCCTGCGT
GAAGAACGTA TTTCGTTCGA CACCGTGGAA CGCGGCTCCC GCGATCTGAC CGTGATGTTC
GAGAGCGAGG CGGATCGCGA AGCGGCCGAG GGCTGGCTGC AGCGCCAGTA TCGCGAGGAA
CTGGTCTGGG AATCGCGTGG GTCCGGTGAC ACCAGCCGAC TGGTAGCCAC ACTGGATGAC
GACCATCTGA CTGAACTGCG CCGTCAGGCG CTGCAGCAAA ACATCTCCAC GCTGCGCTCT
CGGGTCGACG AGCTGGGCGT GGCGGAGCCG ATCATCGCCC AGCAGGGCGA GAACCGGATC
GTAGTGCAGC TCCCGGGCGT GCAGGACACG GCACGGGCGA AGGAGGTCCT GGGCGCGACC
GCGACGCTGG AATTCCGCCT CGTGTCCGAG AGTGGCGATG CTCAGGAGGC CGACGAAACC
GGGCGTGCAC CCTCGGGTAC ACGGCTTTAT TACGAACGCG ACGGGACACC GGTGCTGCTG
CAGCGCCAGG TCATGCTGAC GGGGGACTAC ATCACGGATG CCTCCTCGGG CATTGCCCAG
GATACGGGCG GTCCGGCGGT GTTCATCAAT CTGGACGGCC AGGGCGCGCG GATCTTCTCG
CGCGTGACGT CGGACAACGT CGGCCGGCTG ATGGCGACCG TGTTCATCGA GACCTCGACC
GAGACGGTAG AGGAAGACGG CGAGCAGGTG ATGCGTACCT CCCGTAGCGA AGAGGTCATC
AACGTCGCGC GCATCAACGA GCCCCTGGGG CGTCGCTTCC AGATCTCCGG CCTCGACAGC
AGCCGCGAGG CTCGCAATCT GGCGCTGCTG CTGCGCGCCG GCGCGCTCGC CGCACCGATG
TCGATCGTGG AAGAACGTAC GGTGGGCCCG AGCCTGGGTC AGGAAAACAT CGATCGCGGT
ATGCAGTCGG TGGTCATCGG CTTCATTGCC GTGATGATCT TCATGGTGTT GTACTACCGG
GTGTTCGGAG TCATCGCGAA CGTTGCGCTT GCGTTGAATC TGATCTTCAT TGTCTCGGTG
TTGTCGATGC TGCAGGCGAC ACTCACCTTG CCGGGCATCG CGGGTATCGT GCTGACCGTG
GGTATGGCGG TGGACGCCAA CGTTCTGATT TTAGAGCGAA TACGCGAGGA GTTACGGAAC
GGACTGTCAC CACAGGCCGC GATCGCCTCG GGCTATGACC GCGCGTTCAC TACGATTGCG
GATGCCAACG TGACCACGCT GATCGCGGCG CTCGTACTGT TCCTGTTCGG CACCGGCCCG
ATCAAGGGAT TCGCGATCAC GCTGTCGATC GGGATCATCG CCTCGATGTT CACGGCGATC
ATGGTGACCC GCGCCATCGT CAACCTCACC TACGGGCGGC AGCGTCGGCT GAACCGTCTG
GCTATCTGA
 
Protein sequence
MRNSYPAWLY ALIVVVILGA GLYAAPNLFP EDPSVQIGNP TTGEIDQNIR ELMGTILGAQ 
GVTPHTVEEQ DDGQILLRFE TTDEQSTAAE ILRNALDDNH TVALNMAPAT PRWLRAINGQ
PMALGLDLRG GVHFLMEVDL DAVIGTAMER YSNELRGRLR EERISFDTVE RGSRDLTVMF
ESEADREAAE GWLQRQYREE LVWESRGSGD TSRLVATLDD DHLTELRRQA LQQNISTLRS
RVDELGVAEP IIAQQGENRI VVQLPGVQDT ARAKEVLGAT ATLEFRLVSE SGDAQEADET
GRAPSGTRLY YERDGTPVLL QRQVMLTGDY ITDASSGIAQ DTGGPAVFIN LDGQGARIFS
RVTSDNVGRL MATVFIETST ETVEEDGEQV MRTSRSEEVI NVARINEPLG RRFQISGLDS
SREARNLALL LRAGALAAPM SIVEERTVGP SLGQENIDRG MQSVVIGFIA VMIFMVLYYR
VFGVIANVAL ALNLIFIVSV LSMLQATLTL PGIAGIVLTV GMAVDANVLI LERIREELRN
GLSPQAAIAS GYDRAFTTIA DANVTTLIAA LVLFLFGTGP IKGFAITLSI GIIASMFTAI
MVTRAIVNLT YGRQRRLNRL AI