Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1287 |
Symbol | |
ID | 8807051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1363848 |
End bp | 1364513 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | protein-L-isoaspartate O-methyltransferase |
Protein accession | YP_003460531 |
Protein GI | 289208465 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.711076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCCTG ATGCACGCGG GGCCGGTTTG ACGTCGGGTC GGGCAAGAGA ACGACTGATC CGCGTGCTGG AAGGCCAGGG TATCCATGAT CGCCGGGTAC TCGAGGCCGT TCGCGATGTC CCTCGCCACT TGTTTGTCGA GGAGGCGCTG AGCCATCGGG CTTACGAGAA TATCGCGCTG CCGATCGGGC ATCGTCAGAC CATCTCGCAG CCGTTTATTG TTGCGCGCAT GACCGAGGCC TTGCTGGAGG GCGGTCCTGT GAGCACTGTG CTGGAGATTG GCACCGGGTC CGGCTACCAG GCGGCCGTTC TCGCCAAGCT AGTGGACCGC GTCTACTCCG TCGAACGCAT TCAGGCGCTC AGCCGGAATG CGCGGGAGCT GTTGAGCCGC CTGGGGATCA ACAACGTCAA CCTGCGGCAC GGCGACGGGG CGGAAGGCTG GCCCGAGCGC GCACCGTTCG ATGGCATTAT CCTGACCGCC GCACCGCACA ACGTTCCGGA GACCCTACTG ACACAGTTGG CCCTCAATGG CCGCCTCGTA GCACCGGTGG AGGGGCCGGA CGGGCGCCAG CAACTGGTGC GCTATACGCG GACCGACGAG GCCTATGTGC GCGACATTCT GGATGCGGTC ATGTTCGTTC CCATGTTGCC CGGGGCCGAG CAGTGA
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Protein sequence | MVPDARGAGL TSGRARERLI RVLEGQGIHD RRVLEAVRDV PRHLFVEEAL SHRAYENIAL PIGHRQTISQ PFIVARMTEA LLEGGPVSTV LEIGTGSGYQ AAVLAKLVDR VYSVERIQAL SRNARELLSR LGINNVNLRH GDGAEGWPER APFDGIILTA APHNVPETLL TQLALNGRLV APVEGPDGRQ QLVRYTRTDE AYVRDILDAV MFVPMLPGAE Q
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